| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6417 |
|---|
| Symbol | |
|---|
| ID | 8362601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8060156 |
|---|
| End bp | 8061526 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644968545 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003126022 |
|---|
| Protein GI | 256425369 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAC ACAATCCTAT AGCGCAACTG GTCAATAAGA TACAGCAGCA ATGGCGGGAG
AAAACAACAG GGAAACCATC CCTGCGATTT GTACGGTTCA TGATCAAACC GGAGGAAGCA
CGTGTCTATG AAGGTTTCTG CAAACTGGAA TCTTCTGAAC ATGGAAGTCT GCCGGAAGTC
TTTGTTACCC ACCTCACTTC CTTTGAAGAT GAAGATACGT TCAGCGCAGC CCTGATCAGG
GACTGGCTGG ATACCTACGA TAAAAGTACC GAACTGCTGG CGCAATTGCA GCAGCAGGCG
TCCTTTCAAT GGGATCCGAC TCCTTACAGA GAGGCGCTGA AAAAACAACA GGGTTACCAG
ATGGATGATA CCCTGTTATC ATTGCTGCAG AGCTTTAAAC AGGCATTGCC ACAGGAACGG
AAAGAGCTGG TATTAGCATT GATCCCCCGG CAGGTCAGCA GTACCAAAGA CATGAAGAAC
TGGATCAGTA ACCTGCTCAA AAAAGGCATT CCCGCAGGGG TAAAATTACT GGCCATAGAT
CATGCAGGTG CTGATCACTT TGCCCTGCAG GACAGGTATT TTCCTGATAT GCTGCTAAGC
ATCCATATTC CGATGGACCT GCATAGCGCC ATCAAAAAAC TATCTGCCGC CGGTAATCCC
AATGACCCGG AAATCATGCT GCGCAAATGT GTATTTGAGA TGGGCGCAGC CATGAAAGAT
AAGGATGTGA AACGCCTGCA TCGCTGGGGC CAACAGGCAC TGGATGCTAC ACAACGTAGT
GGAAACAAAG GACTGTTTGC CACTGCACAT ATCATGTATG CAGGTATGCT GTTTCACTTT
AAAAAAGACC CTAAAATACC GGAACTGCTG GAACGCGGAC ACCGTATATC CAAACAGGGT
TTCCAACAGG GAGACGGCGC CTGTCTGCCG CTGATGGTTC AGTTCTACGG CTACCATGGC
GCTTATGCAC AGATACGCCG CCGCTTTACG GAAGCGATCA ACTGGTTTAT ACAACAGGCC
GAACTGGCTG AACAACATAA ATTCTCACAA CAGGCATTGA ATGCCTGGTA CCAGGCTGCT
GAACTCTGCA GAAGGAAAGA CAGCAGCCGC TATTATGATG TACTGGAAAA AGGCTATCTG
GCTGGATGGC ATCTGCCGGA CGACGAAATC ACTGCTTCCA TCTACATCTA TCTGTTGCGG
GACTACTATG ATTATGCACA TGCAAACAGG AAACAAGATA TCGTAAGGGA CATAGACGAA
AGAATGGGCC GCCTCTTCGG CGAAGACTGG AAAGCCGACG TAGACAATAT CCGCAAGAAA
AGAGAACCAT TGATCCTGCC ATTAGAAATG GAAGAACCCG AGGCATTATA G
|
|---|
| Protein sequence | MNEHNPIAQL VNKIQQQWRE KTTGKPSLRF VRFMIKPEEA RVYEGFCKLE SSEHGSLPEV
FVTHLTSFED EDTFSAALIR DWLDTYDKST ELLAQLQQQA SFQWDPTPYR EALKKQQGYQ
MDDTLLSLLQ SFKQALPQER KELVLALIPR QVSSTKDMKN WISNLLKKGI PAGVKLLAID
HAGADHFALQ DRYFPDMLLS IHIPMDLHSA IKKLSAAGNP NDPEIMLRKC VFEMGAAMKD
KDVKRLHRWG QQALDATQRS GNKGLFATAH IMYAGMLFHF KKDPKIPELL ERGHRISKQG
FQQGDGACLP LMVQFYGYHG AYAQIRRRFT EAINWFIQQA ELAEQHKFSQ QALNAWYQAA
ELCRRKDSSR YYDVLEKGYL AGWHLPDDEI TASIYIYLLR DYYDYAHANR KQDIVRDIDE
RMGRLFGEDW KADVDNIRKK REPLILPLEM EEPEAL
|
|---|
| |