| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6416 |
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| Symbol | |
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| ID | 8362600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8058293 |
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| End bp | 8060146 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968544 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_003126021 |
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| Protein GI | 256425368 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTGA ATACAAGTAC CTCATTCTCC ATAGCCGGAC AACAGTTTCA GACCTTCAAT
ACGATCGAAC TGAGACAGTA TCTGGACGAC CATCATGAGT TTGAAATATA TGTGAGTTAT
GACTGGTTTG AAAAACTAGG CGGCGGCATC TCCGGCGCTG CGAATAAATT CCTGGGAGAA
GAAATTGAAA TCACCGTTGC TCCTGCCGAG CAATTACCTG GTGTGAAAGA CCTGATCTTT
AAAGGTATCG TTACAAATAT CACCACAGGA AAAATGGGCG ATGGCACACA TGGACATTGT
ATCATCCGTG GACATAGCCC TAGTATACTG CTGGATGATG ATCCGCATAT TACTTTCTTC
GAAAATAAAT CAGTGTCTGA TATCGTATCT GCCACGGTGA AGAGCTATCC GCCCAATGTG
CTGAAAACAG CCATTAATCC GGAAACAAAA GAGACGCAGA AATATGTAGT ACAGTACAAG
GAAACTTCCT ACGAATTCAT CCGCCGGTTG TCAGAACGCC ATGGAGAATG GTTCTTCTAT
GATGGTCAGC AACTGGTATT TGGCAAATAT TCTCCGCAGA AAGCAGCATT GACCCACCAG
GTAGATCTGC TGGAATTTAA TATCGCCTTA TCGGTAAAAC CTAACAATGC CAAACTGAAT
GGCTACGATT ACCGGCAGGA CAAAGTGGTA GAAGATACCA CACAGTCAAA AGAAACCGGT
AAACTGAATG CTTATTCACA ACACGCCAGT GATATCAGCA GTAAGCTATA CAGCCGGGAA
GGTTTGTATA AGATGAACTA TCCGTTTAAC AGCAGCGCTA AAGCACAACT GGATAAACTG
ACCACCTTAC AGAAAAAGGG CAAACTCGCC AAGATGGTCA CCATCAAAGG CAGCAGTACC
AATCCTTCCT TCCGCATCGG CGATACTGTC AGCATCAAAG AATCCGCTAT GGGTACAGAA
CAACACCATG GCGAATTTAT GATCACCAAT ATCAGACACT ACTGTGGGGC CAATGGCAGC
TACCATAATA TGTTTGAGGG TATTCCTGCA GATGTGGCCA CCCCACATAT CAACCTCGCA
AATATTCCTT ACACAGAACC ACAATCGGCT ATTGTCACTG AAAATAACGA TCCGAAAGGA
CTCGGTCGTA TACGTGTTCG TTTCCGCTGG ATGCAACAGG GACAAACACC ATGGATCAGA
GTCGTATCCG CTTCAGGTGG CGGTGATAAA GGGATGTTCA TCATGCCGGA AGTAGGGGAA
GAAGTCATCA CCGAATTTGA AGGCGGAAAT CCGGAACAAC CATTTGTCAT CGGAGCCACA
TACAATGGCG GTGCTAAGAG CAGCTATGGT AATTCAGGGA ATGACATGAA AGCCCTGAAG
ACCAGAAGTG GTAATACCAT CCTTCTGAAT GATGCAGCGG GTAGTATTAC GGTAACGGAT
AAAAATGGCA GCAGCATGGC CATGGATGGC GCCGGTAATA TCACGGTGAG TTCCCAGACA
TTGATCACAG TAAAAACTGA AGATCATATC GTGGTGGAAG CGCCGAATAA AATTGAGTTC
AAATCCAAAG AAATTCACAT CGTCGGTACA GAGAAAGTAT TCATTGGTGA AGAGAATGCC
AGCATCCTGG TAGATAATGC TGCCAACAAT ATTGAAAGCG GCGCGAAAAC CATTACATCT
GCGGCAGAAT CGGCCAATAC CGTTTCCAGT GGATCTAATC TCTATATCGA CACCAAGAAC
TTCTACGCTG CAGGTGAAAA TGTGGTGAAT ATTGACAGTA GCAAAGGCAA CGTCAAAGTA
AACGGAAAAG TGACCACGGA TATCGTTGGC GGTATGCTGA ACCTGAACTG TTAA
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| Protein sequence | MALNTSTSFS IAGQQFQTFN TIELRQYLDD HHEFEIYVSY DWFEKLGGGI SGAANKFLGE
EIEITVAPAE QLPGVKDLIF KGIVTNITTG KMGDGTHGHC IIRGHSPSIL LDDDPHITFF
ENKSVSDIVS ATVKSYPPNV LKTAINPETK ETQKYVVQYK ETSYEFIRRL SERHGEWFFY
DGQQLVFGKY SPQKAALTHQ VDLLEFNIAL SVKPNNAKLN GYDYRQDKVV EDTTQSKETG
KLNAYSQHAS DISSKLYSRE GLYKMNYPFN SSAKAQLDKL TTLQKKGKLA KMVTIKGSST
NPSFRIGDTV SIKESAMGTE QHHGEFMITN IRHYCGANGS YHNMFEGIPA DVATPHINLA
NIPYTEPQSA IVTENNDPKG LGRIRVRFRW MQQGQTPWIR VVSASGGGDK GMFIMPEVGE
EVITEFEGGN PEQPFVIGAT YNGGAKSSYG NSGNDMKALK TRSGNTILLN DAAGSITVTD
KNGSSMAMDG AGNITVSSQT LITVKTEDHI VVEAPNKIEF KSKEIHIVGT EKVFIGEENA
SILVDNAANN IESGAKTITS AAESANTVSS GSNLYIDTKN FYAAGENVVN IDSSKGNVKV
NGKVTTDIVG GMLNLNC
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