Gene Cpin_6405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6405 
Symbol 
ID8362589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8048625 
End bp8049062 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content45% 
IMG OID644968533 
Productputative histone H1-like protein 
Protein accessionYP_003126010 
Protein GI256425357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.713286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGT ATTCAAAAAA GAGCCAGGAC AAGGTAGAAG AGAACATGAA AGAAATGAAA 
CAAGGTAAAC TGAAAAGCGG CAGAAGCGGT AAGAAAGTAA CCAACCCCAA ACAAGCCATC
GCCATAGGTT TATCTGAAGC CCGTAAATCC GGTGCAAAAG TTCCTAAGAA AGCGGCTGCT
AAAAAAGCTG CGCCTAAAAA GAAAGCTGCC GCAAAGAAAG CGACGCCTAA AAAAGCGGCT
GCTAAAAAGG CTGCTCCTAA GAAAGCGGCC GCTAAAAAAG CTGCGCCTAA AAAAGCAGCT
GCTAAGAAAG CTGCTCCCAA AAAGGCCGCC GCTAAGAAAG CTGCTCCTAA AAAGAAAGCG
GCTGCTAAGA AAGCCGCTCC TAAGAAAAAG GCTGCGGCTA AAAAAGCAAC GCCAAAGAAA
AGAGCAGCTA AGAAATAA
 
Protein sequence
MAKYSKKSQD KVEENMKEMK QGKLKSGRSG KKVTNPKQAI AIGLSEARKS GAKVPKKAAA 
KKAAPKKKAA AKKATPKKAA AKKAAPKKAA AKKAAPKKAA AKKAAPKKAA AKKAAPKKKA
AAKKAAPKKK AAAKKATPKK RAAKK