| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6397 |
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| Symbol | |
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| ID | 8362581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8041524 |
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| End bp | 8042099 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644968525 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003126002 |
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| Protein GI | 256425349 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.48817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGAACAAC TTTCTACCAT AATACAGGGG TGCATTCATA AACAGCCCAG ATGCCAGAAG
TTATTGTATG AGCAATACTA TGGCTATGCT TTTAAAATTG TGTTCCGGTA TATTTACAGG
TACGAAAATG CCGCAGACGT TGTAAATGAT GGTTTTGTGA AGGTGTTTAC CCGTTTTGAC
AAATTCAGTT GCGAGGATAC CGAAGACCAG GAAAAAATGT TGATGGGGTG GATCAAACGT
ATTATGGTGA ATACAGCAAT TGATGAACTC AGGCGGAAAA ATATGATACC GGAGATCGGC
GGTATACCGG AAGAAGTATG GGAAGTACCG GACGTGGGAC AATCAGCAGA ACAGAAACTA
TACTACAAGG AGTTGATCAT ACTGATAAAG GAATTACCAC CTTCCTATCA GGTGGTATTC
AATATGTATG TAATTGATGG ATTCTCCCAC CAGGAAATTG CCGACAAACT GAATATCAGT
ATCGGCACGT CTAAGTCCAA CCTGGCAAAG GCAAGAGCTT ATTTGCAAAA AAAATTAAAC
ACAGATATAC CTGAAATTGA CGTATGCAGC TCCTAG
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| Protein sequence | MEQLSTIIQG CIHKQPRCQK LLYEQYYGYA FKIVFRYIYR YENAADVVND GFVKVFTRFD
KFSCEDTEDQ EKMLMGWIKR IMVNTAIDEL RRKNMIPEIG GIPEEVWEVP DVGQSAEQKL
YYKELIILIK ELPPSYQVVF NMYVIDGFSH QEIADKLNIS IGTSKSNLAK ARAYLQKKLN
TDIPEIDVCS S
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