Gene Cpin_6393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6393 
Symbol 
ID8362577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8038172 
End bp8038714 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content42% 
IMG OID644968521 
ProductYceI family protein 
Protein accessionYP_003125998 
Protein GI256425345 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA TATGCTTTAT TGTGCTGGCC TGTCTGTTAT ATCTGCCGAT GAAGGCACAG 
ACATATATGA CCAGAAACGG AAATGTCAGT TTTTATTCGA AGACACCGCT GGAAGATATT
AAAGCACAAA ATAATCAGGC ATTTGCAGCT GTCGATCTCA CGAAAAAGTC GCTTGCTTTC
ACATTATTGC AACGCAATTT TCTGTTTGCC AAAGAGCTGA TGCAGGAACA TTATAATGAG
AATTATGTGG AGAGCGAAAA GTTTCCTAAG GCACAGTTTA CAGGCACCTT TAGCGGGGAC
GTTGCAAACA AACCTGGTAC TTATAAAGTA CAGGTCAACG GACAGCTAAC CATTCACGGT
GTGACGCAGC AGGTTCAGAA TCTGCCTGCC GAATTACAGA TCGAGGAAGG AAAGATGACG
GCTAAAGCTG CCTTTGCTGT GAAACCATCT GATTACAACA TTAAAATACC ATCGCTGGTT
AAAGACAAAA TTGCGTCACA AATCAACATA CAGATAGTAG CGGTATGTCA GCCGGCAAAA
TAG
 
Protein sequence
MKTICFIVLA CLLYLPMKAQ TYMTRNGNVS FYSKTPLEDI KAQNNQAFAA VDLTKKSLAF 
TLLQRNFLFA KELMQEHYNE NYVESEKFPK AQFTGTFSGD VANKPGTYKV QVNGQLTIHG
VTQQVQNLPA ELQIEEGKMT AKAAFAVKPS DYNIKIPSLV KDKIASQINI QIVAVCQPAK