| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6390 |
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| Symbol | |
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| ID | 8362574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8031966 |
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| End bp | 8036417 |
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| Gene Length | 4452 bp |
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| Protein Length | 1483 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968518 |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003125995 |
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| Protein GI | 256425342 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAA TTGCCATTAG ATTATTGAAA ATCTTACTGA TCGTACTATC TTTTGTCTCA
TCAGCCACAG CACAGAACGG ATACATCTAC GTACACCTAA GCACGTTAAA CGAAGCTTCA
TCTCCTGATT TTCAATTCGC TGTAAACGGA GGTCCGACTA CCATACCCGA TTATTACCTG
AATGATCAAC CCTTTACTAC AGACGCTATC AGCGATATCG GTGCAAGTCA CGGTACGACT
GCTGCTGGTC TGGGGAACGG CGAGTTATGG GTTGCATTGA CCAATACACA GATCTATCAT
CGCCTGGCCG GTAGCAGTGA ATGGATATTG ACCACATGGA ACGGCATAGC ATTAGACGGA
GCTGGTCCCG GACAGTTTGT CAGTATTGAT GCTAACGGTG ATGCATACCT TATGGATGGT
AGTAATCAAC AACTTATTTA TTCTTCTGCT GCACATGCAG GTCTGAAAGC AACTGACATC
AGTTATGGTG AGGGCCGTAT TGCAATCGTG ACAGCAGATG GTACCCTCTG GAAAAATAAT
GCAATAGCAG CACCTTATAC AGACGACTGG AGTCTGTTGG CAGGACCAGG TACCAATGCC
ACCCGACTGG ACATTTTACC TTCTTCTGGT GACATCGTTT ATTACAACGC CGGCAGTGGT
AATGTATTCA CGCTTCCTTT TGCCGGAGGA ACAGCGCTTG ATCTGGGAGC GCCTGGTACT
ACAGATGTCG CTTTTGGTGA CAACGGTACT ATCTATGCCA ATGGTTATCG CTGGAATGGC
AGTAACTGGG TAGCTGATAT AACGCGATAT ACCGTTTTTA GTCACATTAC GGCAGCACAA
CAGGTCTGGT GTGCATCAAG TGTTCCTGCC AGCAGTGGCA TACTTTTCAG CCGTACAGAA
AATGGTATCT GGATAGACGA TGAACGGATC GCAGCAAAGG GAAATGCGAT TGTATTGCCC
GTGAATGCAG GTGCTTATAA CTTGTCATCT GTGGTACCTG CGGGTTGGAA TCTCGTAGGA
TTTACGATAT ATGATCCGGG GGCAAATTCT ACAAATATAC CTGGTATAAC AAATACTACG
ATTGATGTTT CCGCAGGAGA GACCGTACAT GTGATTGCCC AACTGGCATT ACTCGATCCC
CTGGCTATAT CGCAGGCATG TGGTGTGATA TCGACAGAAG ATTTTGGCAT AGCCGCACCC
TTTACAGGAA CCTCATATCA CTACTACAGC AGCAATGATA TCAGCGACGG CTACTATACT
ATTCGGGCTA CTGATAAAAG TGGTTCGCTG ACAGATCACA CAACAGGCAC CGGCAACATG
TTATTAGTGA AAGCAGGTTT TCACCGGGAA TATTTTTATT GGAAACGCCT GACTAATTTA
TTAATCGGAC AACCTTATAA ATTACGGTTC TGGGCTGCTA ATACAAATCC GGCTGCTCCT
GTGAAACCGG ATATACTGGC CGGCATGATC GCTACTGACA GAAGCAGTAT CGTGACATTC
AGTACCGGGG CAATCAACAA CAGCAGCTGG ACGGAATATA CATTTACTTT TATCGCACCC
GCTAATACTG CTGATATTTT CCTGCAGAAC AATACCGCTG GTATCAACGG GAACGATCTC
GCGCTGGATG ATATCGCGGT GATTCCCATG GCGGGTATAT TGCCTGCCAG TACGATGATT
CCTGCTACAA CAGGTATTTG TGAAGGGACA TCGGCTACCA TTTCAAATGG TACGCCAGAC
GGTATATGGA CGACCAGTAA TCCTGTTGCT GCGACAGTAG ATACGGATGG AAAGATCAGG
GCGCTTAGTG CAGGATACAC TGACATTACC TATACCGTGA CAGATGTAAC AGGGTGTAAC
GCAACAGCTA TCAAAACCTT GCAGGTATAT GCTTTGCCAG ATATGATCGC TTTGGCTGAC
AGTAAAGCTG TTTGTCCGGG TACCACACTG AACCTGTCTG CCACCGCCAG CAATACACCT
GGTCCTTATA CTTTTACATG GACCGCTATT CCGCAGGCAG GCAGTGCGAT TACAGATGAT
CAGCTGCAAC AGACTACAGC TGCGCCCAGA TTGGAAGACA GCAGTTTTGT GTATATCGCT
ACAGCGACGG ATGCGCGTGG CTGTACAGCA TCGGGGATGA CGGATACCGT TACTGTAAAT
AAGTTACCGG AAGCGGTGAT CAATTATACA CCAGATCTCT GTAAATCAGG AACCGCCACT
GTCAATCAGA CTGGTACCAC GGGTGGTACT TACTCCTCGA ACAGTGGGCT GGTGATTGAT
GCTGCAACAG GAACAATTGA TCTCGAAAAC AGTACAGCAG GTATACATAC CATCACCTAT
ACATTCAGTA ATGGACAGTG TACCAATACA ACCACTACCA GTGTAAATAT TCACGAGTTG
CCTGTTGTTC CTGCTATCAG CGGCGCTTCG GAAGTTTGTG AAGGAGCGCA ACTTTTATTA
CAGAATACAA TTGCAGGTGG TACCTGGATG ACAGATAATT CATCTATTGC GACGATAGAC
GCTACCGGTT TATTAAAGGG AATTACTGCT GATACGGTTG AAGTGGTATA TGCGATCAGA
GACAATTATG GTTGTGAGAA CACGATCAGC AGGAATGTTA TTGTCAGTCC GTTACCACAG
GCAAGCATTG CATACGATAA GCCTGTATTT TGTACAGTAG GTACTGCGAG TGTTGCTGTG
ACAGGTACAA CAGGTGGTAC GTTTGCTGCG GATGCAGGAT TAAAGATTGA TAGCCATTCC
GGTGTGATAG ATCTTGCTAC AAGTGCACCG GGCAATTATA CAGTTATTTA TAGCTTCAAT
AACGGCAAAT GCGACAATAC CGTTACCTCG CAGATTGTCG TGGAAGGGCC TCCGGTAGTA
GCGCCGATCA GCGGCAAGAA CATGGTGTGT ATCGACAATC AGGGTACTGA TCTGCAGTGT
ATCACTCCGG GAGGTGTATG GAGCAGCAAT GATGCAAATA TCCTGGAGAT AGGCGCTACG
GGACATATTC ATGGAGTCAG GCCGGGTACA GCGGTCATTA CCTATGAAGT AACAACGCTA
AACGGTTGCC GTAATCAAAG AGACTTCACA ATAGAAGTAC CGCCGATGCC GGTGTTTACC
ACAACAACAA AGAGCGCTAC CTGTAACAGT AGCATTGATG GCAGTATTAC CATACCAGTG
CCGGGCGCCG GTTATAAGTA TAGATTAAAT GGTGGAGCCT GGGTAGATGA GAATACATTT
GCCGGTCTGA GGGGAGGTGA TTATAGTGTG CAGGTGATGA ATGAAAAGAG CTGTGTATCT
GCTGTTTCAA CAGTAAAAGT GCCTGCGCCA TTAGATATTG CATTGATCAT TCTTCCAAAA
GACATTACCT GTCATGGCGA TAATTCCGGT TCATTGACTT TATCCGCGAC AGGTGGTACA
CCGCCTTACC GAGTTGCATG GAGTACAGGG GCCACAGGAA ATAAAATTAC AAATCTGCCG
GCCGGTAATT ACTCCGTTAC AGTAACAGAC CAGAATGGTT GTTTTTCAAC AATGAGAATG
CCGCTTACAG AACTGTTCCC GGTGTTTTTA GTGAATGATC CTGTAAAGCA GGAGGGCGGT
TTATTGAGAA TTACCGGCAC CGCTATGTCG GGTGCAGATA TCCTGGTCAC CTATCCGGAT
GGTAGTATCA CTACGACGCA TACAGATGGA AAAGGCGGCT TCAGTACTTT ATCATCCGGC
GCAGTTGGAA CAGGCAGGAT CATGGTGACA GTAACTGATC CTTCCAGTAA AGGGAATTGT
GTAAAATACA TAGACTACAA CAACAGTACT TCTGCTGACC TTTCTATTAT CAAAAGTGTG
ACGATCGCAA AATCACCAAC TGTAGGTGAT CCGGTGACCT TTACACTGAC AGTTAACAAT
AAAGGTCTGG ACCATGCTTC ACAAGTGATC GTGACCGATG ATATTTCAGG TATGCTGGAT
GAAATCACAA ATATGACAGC AACTGGCGGC CGTGTGTTCT TCAATACACG TACGCATCAG
GTGGTGTGGA ATATAGATAC GCTGTATGTA AATAAGCCGA TGCAATTGTC ATTTACCTCA
CGTATCATAT ATGGTGGTAT GCTGGAAAAT TCAGCTACTA TTTCCGGTCG TGAAACAGAT
CCCGATCTGA GCAATAACGA GGCTGCTATC CAGCCTTTAG AGATCTCCCC TGATCTGTTT
ATTCCGAATG TGGTGACGGC AAATGGCGAT GGTAAGAATG ATTATTTCGT GGTGAGAGGT
ATTGAGCAAT ATCCTGGTTC CGTGTTGGAA ATATATAATC GCTGGGGCAG TATGGTATAC
CATGCGCTCA ACTATTCTAA TAACTGGGGC GGTGTGGGAC TCTCTTCGGG CATCTACTAT
TATGTGCTGA AGATTAATAT GTCACGTACC GCAAAAGTAT ATAAAGGATA CATAGAACTG
ATCCAAAAAT AG
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| Protein sequence | MNRIAIRLLK ILLIVLSFVS SATAQNGYIY VHLSTLNEAS SPDFQFAVNG GPTTIPDYYL
NDQPFTTDAI SDIGASHGTT AAGLGNGELW VALTNTQIYH RLAGSSEWIL TTWNGIALDG
AGPGQFVSID ANGDAYLMDG SNQQLIYSSA AHAGLKATDI SYGEGRIAIV TADGTLWKNN
AIAAPYTDDW SLLAGPGTNA TRLDILPSSG DIVYYNAGSG NVFTLPFAGG TALDLGAPGT
TDVAFGDNGT IYANGYRWNG SNWVADITRY TVFSHITAAQ QVWCASSVPA SSGILFSRTE
NGIWIDDERI AAKGNAIVLP VNAGAYNLSS VVPAGWNLVG FTIYDPGANS TNIPGITNTT
IDVSAGETVH VIAQLALLDP LAISQACGVI STEDFGIAAP FTGTSYHYYS SNDISDGYYT
IRATDKSGSL TDHTTGTGNM LLVKAGFHRE YFYWKRLTNL LIGQPYKLRF WAANTNPAAP
VKPDILAGMI ATDRSSIVTF STGAINNSSW TEYTFTFIAP ANTADIFLQN NTAGINGNDL
ALDDIAVIPM AGILPASTMI PATTGICEGT SATISNGTPD GIWTTSNPVA ATVDTDGKIR
ALSAGYTDIT YTVTDVTGCN ATAIKTLQVY ALPDMIALAD SKAVCPGTTL NLSATASNTP
GPYTFTWTAI PQAGSAITDD QLQQTTAAPR LEDSSFVYIA TATDARGCTA SGMTDTVTVN
KLPEAVINYT PDLCKSGTAT VNQTGTTGGT YSSNSGLVID AATGTIDLEN STAGIHTITY
TFSNGQCTNT TTTSVNIHEL PVVPAISGAS EVCEGAQLLL QNTIAGGTWM TDNSSIATID
ATGLLKGITA DTVEVVYAIR DNYGCENTIS RNVIVSPLPQ ASIAYDKPVF CTVGTASVAV
TGTTGGTFAA DAGLKIDSHS GVIDLATSAP GNYTVIYSFN NGKCDNTVTS QIVVEGPPVV
APISGKNMVC IDNQGTDLQC ITPGGVWSSN DANILEIGAT GHIHGVRPGT AVITYEVTTL
NGCRNQRDFT IEVPPMPVFT TTTKSATCNS SIDGSITIPV PGAGYKYRLN GGAWVDENTF
AGLRGGDYSV QVMNEKSCVS AVSTVKVPAP LDIALIILPK DITCHGDNSG SLTLSATGGT
PPYRVAWSTG ATGNKITNLP AGNYSVTVTD QNGCFSTMRM PLTELFPVFL VNDPVKQEGG
LLRITGTAMS GADILVTYPD GSITTTHTDG KGGFSTLSSG AVGTGRIMVT VTDPSSKGNC
VKYIDYNNST SADLSIIKSV TIAKSPTVGD PVTFTLTVNN KGLDHASQVI VTDDISGMLD
EITNMTATGG RVFFNTRTHQ VVWNIDTLYV NKPMQLSFTS RIIYGGMLEN SATISGRETD
PDLSNNEAAI QPLEISPDLF IPNVVTANGD GKNDYFVVRG IEQYPGSVLE IYNRWGSMVY
HALNYSNNWG GVGLSSGIYY YVLKINMSRT AKVYKGYIEL IQK
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