Gene Cpin_6381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6381 
Symbol 
ID8362565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8021704 
End bp8022699 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content49% 
IMG OID644968509 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003125986 
Protein GI256425333 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGTG AGCACATGCG TGCACTAGTC CTTGAGGATT ATGGCGCCCC GTTCGTATAT 
CGCGTAATAG ACAGGCCAAG ACCGGATTTT GGAGAGGTTC TGATAAGAGT AAAGGCGAGT
GGTGTAAATC CACTGGATGC AAAAATTAAA GCTGGAGAAG CGGAGCACGC AAAGCAGCCA
TTGCCGGCAG TACTGGGTAT TGACATGGCA GGTGTGGTTG TAGAAGTAGG AGAGGGTGTA
ACAAGTTATG CGCCTGGTGA TAAGGTATAT GGCATGACAG GTGGCGTGGC AGGTTTACAG
GGCTCTCTGG CAGAGTATGT AGCCGTAGAC GCAGAACTGA TCGCCCGGAA ACCAGCTAAT
CTTACCATGC GTGAAGCAGC TGCAATACCT TTTGGTTTTG TGACCGCATG GGAAGGCCTG
GTAGACAAGG CAAAGATCGA AGAAGGACAG AAAGTACTGA TACATGGTGG TTCCGGTGGT
ATCGGACAAA TGGCGATTCA GATCGCCCGT GCATTTGGTG CGGATGTTTA CGCAACTGAC
ACAGATGATA AACAAGCGAT CATTGAGTGG TTTGGTGCAA CACATATCGA TGCAGATACC
GTAAGTGTAG CGGATTATGT GAATAAATAC ACCCGTGGCG CTGGTTTTGA CATCGTCTTC
GATACAGTAG GCGGCGCCAC CTTAGACGCT TCTTTTGAGG CTGTAAAGCA GAATAATGGC
CATGTGATCA GTTCCCTGGG ATGGGGCTCT CACAGTCTGG CGCCATTATC ATCCAAAGCA
GCTACTTATT CCGGTGTCTT CACCTTACTG CCAATGCTGA CAGGAATGGG CAGAGAGCAC
CATGGCGCTA TTTTAAGAGA AGCAACAAGA ATGGCGGAAG CAGGACAGAT ACTGCCATTG
CTGGATCCGC GTCACTTTCA TCTGCAGACA GCAGATCAGG CACTGACCCT GATCGTGCGC
AGAGGTGAAA CTGGTAATAT CGTCGTTGAG ATTTAA
 
Protein sequence
MSSEHMRALV LEDYGAPFVY RVIDRPRPDF GEVLIRVKAS GVNPLDAKIK AGEAEHAKQP 
LPAVLGIDMA GVVVEVGEGV TSYAPGDKVY GMTGGVAGLQ GSLAEYVAVD AELIARKPAN
LTMREAAAIP FGFVTAWEGL VDKAKIEEGQ KVLIHGGSGG IGQMAIQIAR AFGADVYATD
TDDKQAIIEW FGATHIDADT VSVADYVNKY TRGAGFDIVF DTVGGATLDA SFEAVKQNNG
HVISSLGWGS HSLAPLSSKA ATYSGVFTLL PMLTGMGREH HGAILREATR MAEAGQILPL
LDPRHFHLQT ADQALTLIVR RGETGNIVVE I