Gene Cpin_6377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6377 
Symbol 
ID8362561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8018191 
End bp8018757 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content45% 
IMG OID644968505 
Productregulatory protein 
Protein accessionYP_003125982 
Protein GI256425329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTACT GCCGGCGTGT GTTTAAAAAA CAACACGTGC ATCCGGAGCA ACAGACAGGA 
CTTTTCGGCG TATTCAGGCT GGAGGATGTG TGGCAGTACA AGACAGGATG GACGAAACAA
TGCATGGATT ATTATAAGAT AGGACTGATA AGAGGAAGTA AGCGCTCCCA CTATACTGAT
AATAGTATGG CGGGATCAGC AACCACACTG GTGTTTTTCA ATCCACATGC GCCGTATACA
TGGGAATCAT TGGAGGCGGA TAAAACGGGA TTCTGCTGCG TGTTCAGCGC CCCGTTCTTT
ACGACACAGA TGCAGGAGAA GATCAATGCG CTTCCCATGT TTATGGCCGG TGGAAAACCG
GTACAGGCAC TGACAAAAGA ACAGGATAAA GTAGTAGCGG ATATATTCGT CCGCATGTTG
GAAGAGTGGC CCTCTGATTA CAGGTATAAG TATGATCTGT TAAGGAATTA TGTCACGCAG
TTGATTCATC TCGCATTGAA AATGCAAATG AGTGACGGCG CCGATACAAA AGGAGAAAGT
TACAACAGCA AAGAAATTCA CAATTAA
 
Protein sequence
MTYCRRVFKK QHVHPEQQTG LFGVFRLEDV WQYKTGWTKQ CMDYYKIGLI RGSKRSHYTD 
NSMAGSATTL VFFNPHAPYT WESLEADKTG FCCVFSAPFF TTQMQEKINA LPMFMAGGKP
VQALTKEQDK VVADIFVRML EEWPSDYRYK YDLLRNYVTQ LIHLALKMQM SDGADTKGES
YNSKEIHN