| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6368 |
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| Symbol | |
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| ID | 8362552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8004774 |
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| End bp | 8007971 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968496 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003125973 |
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| Protein GI | 256425320 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.161575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAG CCAGTATTAC TGGAAAATCG TACCTGACGG TATGGGTAAT GATTTTCTTT
TGGGCTGTCA CTATGCCTGC GCAAGCACAA ACCCAGTCTG ACCCGGGACG AAAGATCTCC
GGCAGCGTTA CCGCCGGAGA AACAGGCACA CCTGTTCCGG GGGCTTCAAT TACTATTAAA
GGGACAAAAA GAATGACCAC AACTGACGGG GCAGGGAATT TTAGTATCCC GGCTGCTCCG
GGAGAGGTAA TTAATATTGC CTCCATGGGT TTCATTACCC GGGAATTCAA GGTAGGTAAT
TCCGCCACTG TGAATGTAGT GATGCAGGAA GATTACCGCA AACTGAATGA CGTGGTGGTC
GTCGGGTATG GTAAAATGAA GAAAACAGAC CAGAGCAGTG CGCAGGTCTC CATTACCTCC
ACAGAAGTCA ACCGTACCAT CAATACCACC ATCGACCAGG CTATACAGGG CCGTGCCGCC
GGTGTGTATG TTACACAAAA CTCCGGGCAA CCGGGTGGTG GTATCTCCGT GAATATCCGT
GGTGTTAATA CCCTCAGCGG TACCAATGAA CCGCTGTATG TCATCGATGG GGTACAGATG
CAACCGGCTA CGGTGTCTTA TGGAGCGACC AGTTCTGTTA ATCCGCTGGC AGGGATCAAT
CCTTCGGATA TAGAGTCCTT AGAGATACTG CAAGGACCTT CTGCCACTGC GGTATATGGT
TCCCGGGCCA CCAATGGGGT GATCCTGGTG ACTACCAAAA GAGGGAAGTC CGGACAGATG
AAACTGTCTT ATAACTATCT CTATTCGCTG CAGGACAAAC CGGAGGCAGT CAATACCATG
ACATTGCAAC AGTTTGCCAT CATGAACAAT GAAATAGCCC AGTTGCTGAA CCGTACCCCT
ACACCGGAAT TTCAGAATCC CGGTGTGTTA GGGAAGGGGA CGAACTGGCA GGATGCCCTG
TTCCGTACTG CTTCATTACA GAAGCACCAG GTGAATATCA GCGGAGGCGC CAGCAATACC
ACCTATTATA TGTCAGGCGA GTATTTTGAC CAGGAAGGGG TGGCAATCGG TTCTGATTTC
AACCGTTACT CTTTCCGCCT GAACCTGGAT AACCAGGCTT TCAAATGGCT GAAGCTGAGT
ACGTCCCTGA ACTTCTATCA GACGAAGGAA AAACTGGCGT CTACCAGTGA AGACGTAATC
AGAAATGCCA TTAACCTGGC CCCTAATATT CCCGTGAAAA ATGCAGATGG CAGCTGGGGC
GGTGCTACGG AAAATGAGTA TGGTTCCAAT GCGAAATATG CGCCGCTGAA TCCTGTTGCA
ATCGCCAGTC TTGTGAGCAA TGATTATAAA CGTACCGGTG GACTGGGCGG CGCTACTGCC
GAAATCTCGA TCATAAAAGG ACTGACCTTC CGCACCAGCT TTAACGGGAA TTTCGAATAT
ACAGATGGCA GCAAGTTTAT TCCTACCTAT CAGTTAGGTT ATAATGTCAA TGAGAAAGCT
TCGCTCGCAG TATCCAACGG AAAGAACTTC TACTGGAACC TGAACGAATT ACTGCAATAC
TCCCGTGATA TCGGTAAGCA TAGTTTCAGT GTGATGGTGA GCCACGAGGC ACAGGCATGG
AACTATCAGG GTTTCTCTGC ACAGCGTGTA GGATTCGCCA GCAACAGTAT CCCTTCTCTC
AACCTGGGTA ATGCCTTAGG ACAAACAACG GGTAGTTACA AAGGATCGGG TGCACTTGAA
TCTTATCTCG GCCGTGTTAA CTACACGTAC GATAACAAGT ATATCGTCCA ACTGGCTGGC
AGAGCAGATG GTTCCTCCAA CTTTGGTGCA GATGACAGAT GGGGATATTT TCCTTCTGTA
TCGGTAGCCT GGCGTCTGAC AGGGGAGGAA TTTATGAAAT CATTACCCTT TATCAACGAA
CTGAAGATCC GTGCAGAATA TGGTACGACC GGTAACAATG GTAGCGGTGG TGCACAGTTC
TCTTCCCTGA CTTCTGTGAC TACGCCATGG GGCGCAGGTT TCCGTACCGG ACAGTATGGT
AACTCCGGAC TCAAATGGGA ATCCACCGAA ACAAAGAACA TCGGTTTTAA CATGAGTGTA
TTAAAAGACC GTATACAACT GGAAGGTGAT TTCTATATCA AGAAAACTGA CAACCTGCTG
ATGCCTAATC CATTGCCTGC CTATATGGGT ACACAGGGAG AAGGCGCTAT CAATGCTCCA
ATTGTAAATA TCGGGGCGAT GCAGAACAAA GGTTTTGGTA TTACACTGAA TACGGTTAAT
ATAGATAACA AACAGGGTTT CAGCTGGAGG ACCAATTTCA ATATCTCTTC TTTCAAAACA
AAGATCACGA AGTTCTATTC TGATGCTGCT TTCCTGTCAA GGTCTGCCTG GTTCATGAAT
AACTTTACCT CCCGTTCTGT GATCGGCGAT GCGCCCTGGC AGTTCTATGG TTATGTCGCA
GAAGGACTGT TTCAGTCTGT CGATGAAATC AACAGCAGCG CTATTCCTGC ACAATCTGAC
GGTACCCGTT TACCTGTGGC TAAAGACGGT GGCGTATGGG TGGGCGATAT CAAATACAAA
GACCTGAATG GGGATAATAT CATCGATTCA CGTGATCAGA CATTTATCGG TAACCCCTGG
CCAAAGCTGA CTTTTGGTTT GACAAATACT TTTTCATGGA AAGGATTTGA CCTGAGTGTA
TTGATGACCG CTGCACAGGG CAATGACATC TTCAATTATC TCCGTTTTGA GAATACGAAT
CCGAATAATA TCAATCTCGG CCGGAACTTG TTACAGGAAT CATTTAATTA TGCACGCGTC
GGAGATGTAG GTGGTAAGAC CATCTTAGAG AATCCCGGCG CCAATGTACC CAGGATTGTA
GGCACAGATG TAAACGGTAA CGGCAACCGT TTTACGAACC TCTATGTAGA AGACGGATCT
TATATCCGCA TTAAGAATGT ACAGTTAGGA TATAACATTC CACATGCATT ACTGAGACAA
CAGTCTGTCG TTAAAAACAT CCGCCTGATC GCAGGTGTAC AGAACCTGGC CACTTTCACC
AAATACAAAG GATACGATCC TGAAGTAGGT TCTTATCTCG GTAAGGAAGT GCAGCTGAGC
AGTCAGCTGA TTGGTGTGGA TGCCGGTCGC TATCCATTGA CCCGCTTGTA TAGCGCAAGT
GTGGCGGTTG ATTTTTAA
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| Protein sequence | MKRASITGKS YLTVWVMIFF WAVTMPAQAQ TQSDPGRKIS GSVTAGETGT PVPGASITIK
GTKRMTTTDG AGNFSIPAAP GEVINIASMG FITREFKVGN SATVNVVMQE DYRKLNDVVV
VGYGKMKKTD QSSAQVSITS TEVNRTINTT IDQAIQGRAA GVYVTQNSGQ PGGGISVNIR
GVNTLSGTNE PLYVIDGVQM QPATVSYGAT SSVNPLAGIN PSDIESLEIL QGPSATAVYG
SRATNGVILV TTKRGKSGQM KLSYNYLYSL QDKPEAVNTM TLQQFAIMNN EIAQLLNRTP
TPEFQNPGVL GKGTNWQDAL FRTASLQKHQ VNISGGASNT TYYMSGEYFD QEGVAIGSDF
NRYSFRLNLD NQAFKWLKLS TSLNFYQTKE KLASTSEDVI RNAINLAPNI PVKNADGSWG
GATENEYGSN AKYAPLNPVA IASLVSNDYK RTGGLGGATA EISIIKGLTF RTSFNGNFEY
TDGSKFIPTY QLGYNVNEKA SLAVSNGKNF YWNLNELLQY SRDIGKHSFS VMVSHEAQAW
NYQGFSAQRV GFASNSIPSL NLGNALGQTT GSYKGSGALE SYLGRVNYTY DNKYIVQLAG
RADGSSNFGA DDRWGYFPSV SVAWRLTGEE FMKSLPFINE LKIRAEYGTT GNNGSGGAQF
SSLTSVTTPW GAGFRTGQYG NSGLKWESTE TKNIGFNMSV LKDRIQLEGD FYIKKTDNLL
MPNPLPAYMG TQGEGAINAP IVNIGAMQNK GFGITLNTVN IDNKQGFSWR TNFNISSFKT
KITKFYSDAA FLSRSAWFMN NFTSRSVIGD APWQFYGYVA EGLFQSVDEI NSSAIPAQSD
GTRLPVAKDG GVWVGDIKYK DLNGDNIIDS RDQTFIGNPW PKLTFGLTNT FSWKGFDLSV
LMTAAQGNDI FNYLRFENTN PNNINLGRNL LQESFNYARV GDVGGKTILE NPGANVPRIV
GTDVNGNGNR FTNLYVEDGS YIRIKNVQLG YNIPHALLRQ QSVVKNIRLI AGVQNLATFT
KYKGYDPEVG SYLGKEVQLS SQLIGVDAGR YPLTRLYSAS VAVDF
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