Gene Cpin_6348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6348 
Symbol 
ID8362532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7984084 
End bp7984917 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content41% 
IMG OID644968476 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003125953 
Protein GI256425300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTC GTAGACTATT ATTACTGCTG TTACCAGTGG TACTAGGCTC CTTTATGCCA 
ATGAAAGGAA TTACCTGGAC AGCAATTGGC GATTCCTTTA CTTATTTAAA TGACCACCTT
GAGGAGAGTG ATAACCGGGT TGAAAAAGGT TGGATAACCA GAACTACGGA ACTGGTACCA
GGTCTGACAT ATATCAATCA TGGCCACAAT TACTGGACAA GTGTTGAAAT TGCCTACAAA
ATAGATCAAT TCGATCTGAA ACCTTCAGAT GTATATACGA TATTTCTCGG TACGAATGAC
TGGTGGCTAG GAGTAAAACC CGGTACTTTG GATGATTACA CCAACAACAC GGGTATCGGT
ACTGTGAGTG GGGCTTTCAG AGTGATTATT GACAGGTTAC GTAGCCTCAA TCCTAAAGCG
CATATTATAC TGATGACGCC TATGCAGCGT GGGGATTTTG TTTACATTCT TAATAACAAG
GTTAATAGCT GGGGATCTTA TAAAGATCAG GAGGGACAGA GTCTGGAGGC TTTTGTGAAT
GTGGTGAAGG CAATCGGAAA AGCAGAAAAT ATGGAGATCG TGGACCTTTA CAGTGAGCCA
AGACTGGAGA TCAGCCAGGC CGTGAAGTTT AAATACCTCA GAGATCCGCA AACGCGTGAA
TACAAAGAAT ATGCTTATCC TGATTATATC AACATACCAT ATACTGTGGG AGATAAATAT
CCTTATCCGT TAAAAGCAGT AGATGTGACT TATGATGGTA TACATCCCTC AGATAAAGGG
TGTGAGATTA TTGCAGAGTT ATTAGCGAAA GTGATAAAAA ATATTCGGTT TTAG
 
Protein sequence
MKVRRLLLLL LPVVLGSFMP MKGITWTAIG DSFTYLNDHL EESDNRVEKG WITRTTELVP 
GLTYINHGHN YWTSVEIAYK IDQFDLKPSD VYTIFLGTND WWLGVKPGTL DDYTNNTGIG
TVSGAFRVII DRLRSLNPKA HIILMTPMQR GDFVYILNNK VNSWGSYKDQ EGQSLEAFVN
VVKAIGKAEN MEIVDLYSEP RLEISQAVKF KYLRDPQTRE YKEYAYPDYI NIPYTVGDKY
PYPLKAVDVT YDGIHPSDKG CEIIAELLAK VIKNIRF