Gene Cpin_6343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6343 
Symbol 
ID8362527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7978133 
End bp7978768 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content46% 
IMG OID644968472 
Productresolvase domain protein 
Protein accessionYP_003125949 
Protein GI256425296 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGC AGCAAGGCGA TGTATGCTTG CTTCGGCGCG TCATTGACTT TTTTGTAGCG 
CGTGAATTTT TCGAAGTAGA TAGCGGAAAG AATGATAAGC GCCCTATCCT CAAAAGCGCC
TTACGTTACT GCAAGAAAAT AGGCGCTATT TTGATTATAG CCAAGATAGA CCGCTTGGCG
CGTCATGCCT TTTTCGTGGC GCGACTTCTC GAAAGCCCTG TAAAAATTAT TGCCGCTGAT
AAGCCCAACG CAACTAAACT TCAATTGTTA GAAGACGCGA TTGAGGCCGA AAAAGAAGGT
GACATTATCA GCAAGCGCAC AAGCTCTGCA ATGCAAGCGG CCAAACGGCG TGGTATTCGG
TTTGGTGTAG CGTGTAAGGA CCTCGCGCAA AAGAATAAAC AGGCGGCAGA TGATTTCGCC
AAAAAAATGA TACCGATCAT AGAAGAGCTA ATTGCGCAGG GATTTAAAAC AATTCGCGCC
CTGGCTGCCG AATTAAACCG TCGTCATATT CATACATTCC GCCGCCATCG TGCAAAGTGG
CACCGAAATA CTGTGTATAA CCTTCTGAAC AGGATCAAGG AACTCTCAAT CAATGACGAT
ACCCCATCTT TCACCGAAAC ATCTAATTCG TGTTAA
 
Protein sequence
MQAQQGDVCL LRRVIDFFVA REFFEVDSGK NDKRPILKSA LRYCKKIGAI LIIAKIDRLA 
RHAFFVARLL ESPVKIIAAD KPNATKLQLL EDAIEAEKEG DIISKRTSSA MQAAKRRGIR
FGVACKDLAQ KNKQAADDFA KKMIPIIEEL IAQGFKTIRA LAAELNRRHI HTFRRHRAKW
HRNTVYNLLN RIKELSINDD TPSFTETSNS C