| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6324 |
|---|
| Symbol | |
|---|
| ID | 8362508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7962332 |
|---|
| End bp | 7963168 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644968453 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003125930 |
|---|
| Protein GI | 256425277 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTGA AGGGGAGAAT TCGCGGTAAT GGCGGACAGC TTGCAAGCTA TCTTTTACGC
AAAGGCGAGA ATGACACGGT AAGACTCTTT GATATTCGAG GGACAAGCCA TCTTTATGAT
TTGCGCAAGT CATTGCTGGA AATGTCGTTC ACCAGTGAGC TAACGAGAAC TGACAAAGGG
CTTTATCATG TGCAGATCAA TCCCCGCCCT GGAGAGGATA AGAAGATGAC CGCCGATGAT
TGGCTCCGAG CCGCTGAGAT CATGGAAGAG GAAACAGGCT TTAAAGGTCA GAAACGCATC
ATGGTCATGC ACGAGAAAAA GGGCCGTATT CATATGCACG TCGCGTGGGA ACGGTATTCT
CACGGCACAG GAAAGATGAT CTCGAACAAA TATTCTCGTT ACGCACAAGA TAGAGCCAGA
AAGCGAATGG AGAATGAATT CAGCCAGAAT AGGACGCCTG ATAAGAACAT TGAGCGTCCG
GAACTGAATA AGTTACTCGC TGAATTATGG GCGCTTCATC CGTCAGGGAA AGCCTTTATC
AAGGCAGTCG GTCAATACGG TTACACAGTT TGTCGTAGTG AAGGTCGTCG CCCGATGGTT
ATCATTAATA AAGCAGGGCG TTCCTTTGAT TTAGTGCGGG AAACCAAAGT AAAGACGAAG
GATATGCGGG AACGATTAAA AGGGTTGCAA TTACCGCATG ACAAACAAGT CATCGCATCT
ATACGAGAAA GACAGCAAAA CGATACAAAG GAAACGCCAC GAGAGAAGCG TATAAGGGAA
CTGAAAGAAC AGATGGAGCA GCACGAAAAA GCTAAAGACA AACAACAAGG ACGTTAA
|
|---|
| Protein sequence | MIVKGRIRGN GGQLASYLLR KGENDTVRLF DIRGTSHLYD LRKSLLEMSF TSELTRTDKG
LYHVQINPRP GEDKKMTADD WLRAAEIMEE ETGFKGQKRI MVMHEKKGRI HMHVAWERYS
HGTGKMISNK YSRYAQDRAR KRMENEFSQN RTPDKNIERP ELNKLLAELW ALHPSGKAFI
KAVGQYGYTV CRSEGRRPMV IINKAGRSFD LVRETKVKTK DMRERLKGLQ LPHDKQVIAS
IRERQQNDTK ETPREKRIRE LKEQMEQHEK AKDKQQGR
|
|---|
| |