| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6311 |
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| Symbol | |
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| ID | 8362493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7949964 |
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| End bp | 7952495 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644968438 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_003125917 |
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| Protein GI | 256425264 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.420844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.88955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATA AATCTTTACA GCCTGACCGC TCTCCCATGA GTGGTTTTGT ACAGGTAAGG
GGCGCCAGGG AACATAATCT TAAAAATGTA GACCTGCAGA TCCCCAGGGA TGCTCTCGTT
GTATTTACGG GTGTATCCGG TTCGGGAAAG TCTTCACTGG CTTTTGGGAC TTTATATGCA
GAAGCCCAGC GCCGGTACCT CGAATCGGTT TCTCCCTATG CCCGCCGATT GTTTCACCAG
ATGCCCGTTC CGGAAGTAGA TGAAATTGAT GGGCTGCCGC CGGCAGTCGC CCTGCAACAA
CAACGGGGTA CGCCTACCAC GCGTTCTTCT GTAGGTAGTG TGACTACCTT ATCCAATCTG
CTGCGTATGC TGTACTCCCG TGCAGGTGAT TATCCGCCCG GACAGGCTAT TATTTATGCG
GAAGCATTTT CTCCTAATAC TGCCGAAGGC GCTTGTCCGC AATGTCATGG ATTAGGTCGT
ATCTATGACG TCACAGAACA GTCTATGGTG CCTGATGATA CACTGACCAT CCGGGAAAGG
GCTGTTGCCG CCTGGCCTAC TGCCTGGCAG GGACAGAACC TGCGCGATAT TCTCACCACG
CTTGGTTATG ATGTGGATAC GCCGTGGAAA GAGTTGTCTA AAAAGGACCG TAACTGGATC
CTGTTCACGG ACGATCAGCC TGTCGTTCCC GTTTACCCGG GCTATTCGCC TGAAGAGGTA
AAACGTGCCC TCAAAAGAAA AGAAGAGCCG AATTATATGG GCACCTTCAT GAGTGCGAAA
CGCTACGTGA TGCACACCTT CGCCAACACG CAGAGTGCCA TGATGAAAAA GCGGGTTACC
CAGTATATGC TCAGTACCGC TTGCCCTACC TGCGATGGTA AACGGCTGCG GAAAGAATCG
CTTTCCGTAA AATTCGCAGG TCTTGATATT ACTGAAATGT CAAGACTGGC ATTGGCCCGC
TTGTATAGTA CGGTTAAGCC TTATGCGAGT AACAAAACGC CATTGCGCGC CGATCATGAT
CACCCGGAAA AGGCGATCGT CACACAACGT ATTGCGGTCG ATCTGGCAGC TCGCCTGGAA
GTACTGATGG AACTGGGATT AGGATACCTC ACCCTGGAAC GCAGCACACC CACTTTATCT
CCTGGTGAAT TGCAACGTCT CCGGTTGGCT ACACAGGTAC GCTCTAATCT GTTTGGAGTC
GTATATGTAC TGGATGAACC TTCTGCTGGT TTACACCCCG CCGATACAGA GGCTTTATTA
AAAGCGCTCG ATCGTTTGAA AACGGCCGGT AACTCCCTCT TTGTGGTAGA ACACCAGCTG
GATGTGATCA GACACGCAGA TTGGATTGTG GATGTTGGTC CGGCGGCCGG TGAGCATGGC
GGACAAATAC TCTACAGTGG TCCGCCGGCA GGACTGGCAA ACGCTGCGCA ATCTGTTACC
CGTAAATATC TCTTTGAAGA AAATACTGCT ATCTCTCATA AGCCGCGTAC CCCTAAAGGG
ACCCTGCAAC TGCGGGATAT TACCCGTAAT AACCTGCACC AGTTGTCCGT GGATTTCCCA
TTGGGCGTAT TCACGACAGT TACCGGTATA TCCGGTTCCG GTAAATCCAG TCTGGTCAGT
CAGGCGCTCG TAGAGCTGGT ATTAGGAAAG CTCGGTCAGC AGCACAGTGC TGACGAAGAA
AACGCCGATC TGCTGGAACA GGAAGCCCCC ACAACGCTGG AAGGCCATAT CGCAGGGGGA
ATGGAGCATA TTAAACGACT GGTGCTGGTT GATCAGCAGC CTATTGGTCG TACACCAAGA
TCTAATCTCG CTACTTACAC CGGATTGTTT GATCATGTGC GTAAACTTTT TGCATCCACC
AAACAAGCCA AAGCGCGTCG TTATGACGCA GGCAGGTTCT CTTTTAATAT CGCCAAAGGA
CGTTGTGAAA ACTGTAACGG AGAAGGTTTC GTTATGGTTG AATTGTTATT CCTGCCCAGC
GTATATGCAC CTTGTCCTGT TTGCGAAGGA TCGAGATATA ATGCCAAAAC ACTGGAGATT
AAATACCGGG AGAAATCCAT CGCCGATGTG TTGCAGATGA CCGTAAATGA TGCCTGGGAA
TTCTTTAGTG ATGAAGCGAC GATCCATCAT TCCCTGCACG TATTACGGGA AGTGGGATTG
GGGTATCTCC GCCTTGGGCA ACCGGCGACA GAATTATCCG GAGGCGAAGC ACAGCGTATT
AAACTGGCCA CTGAACTGCA ACGTATGGGG CGTGGTAATG CACTCTACAT ACTGGATGAA
CCCACCACGG GTTTACATCC TGCTGATGTG GAAAAGCTCA TGTCGCAGCT GAACCGTCTC
GTAGATGCCG GTAACACCGT CATCGCAGTA GAACATAACA TGCGTGTACT GGCAGGCAGT
GACTGGGTCA TTGATATCGG GCCCGGTGCA GGAGAGGAAG GAGGTAAAGT AGTGGCCAGC
GGAACGCCGG CTACTGTAGC CAAAGACAGA AACAGCCGTA CCGCCGCATA TCTTGCACGT
CATCTTAAAT AG
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| Protein sequence | MSDKSLQPDR SPMSGFVQVR GAREHNLKNV DLQIPRDALV VFTGVSGSGK SSLAFGTLYA
EAQRRYLESV SPYARRLFHQ MPVPEVDEID GLPPAVALQQ QRGTPTTRSS VGSVTTLSNL
LRMLYSRAGD YPPGQAIIYA EAFSPNTAEG ACPQCHGLGR IYDVTEQSMV PDDTLTIRER
AVAAWPTAWQ GQNLRDILTT LGYDVDTPWK ELSKKDRNWI LFTDDQPVVP VYPGYSPEEV
KRALKRKEEP NYMGTFMSAK RYVMHTFANT QSAMMKKRVT QYMLSTACPT CDGKRLRKES
LSVKFAGLDI TEMSRLALAR LYSTVKPYAS NKTPLRADHD HPEKAIVTQR IAVDLAARLE
VLMELGLGYL TLERSTPTLS PGELQRLRLA TQVRSNLFGV VYVLDEPSAG LHPADTEALL
KALDRLKTAG NSLFVVEHQL DVIRHADWIV DVGPAAGEHG GQILYSGPPA GLANAAQSVT
RKYLFEENTA ISHKPRTPKG TLQLRDITRN NLHQLSVDFP LGVFTTVTGI SGSGKSSLVS
QALVELVLGK LGQQHSADEE NADLLEQEAP TTLEGHIAGG MEHIKRLVLV DQQPIGRTPR
SNLATYTGLF DHVRKLFAST KQAKARRYDA GRFSFNIAKG RCENCNGEGF VMVELLFLPS
VYAPCPVCEG SRYNAKTLEI KYREKSIADV LQMTVNDAWE FFSDEATIHH SLHVLREVGL
GYLRLGQPAT ELSGGEAQRI KLATELQRMG RGNALYILDE PTTGLHPADV EKLMSQLNRL
VDAGNTVIAV EHNMRVLAGS DWVIDIGPGA GEEGGKVVAS GTPATVAKDR NSRTAAYLAR
HLK
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