Gene Cpin_6304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6304 
Symbol 
ID8362486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7943978 
End bp7944757 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content47% 
IMG OID644968431 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003125910 
Protein GI256425257 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.709567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAC AATTTATAAT CATACACCGG CAGGTAGCCC CATATGTGGC TCATATACAG 
TTAAACCGCC CCAAAGAACT CAATGCACTG AACCTTGAAC TGATGATTGA GCTCAGGGAT
GCATTAAAAA TGTTGGATGC GGATGACAAT GTTCGTGCAA TCGTCATCAG CGGTAATGAA
AAAGCATTCG CTGCAGGCGC GGATATCAAA CAGATGGCGG GGAAAACTGC CATGGACATG
TATAACATTG ACCAGTTCAG CACCTGGGAC ACAATAAAAA AAACTAAAAA GCCGTTGATT
GCGGCAGTAA GCGGCTTCGC GCTGGGAGGG GGATGTGAGC TGGTGATGCT ATGCGATATG
ATAGTAGCCA GTGAAACAGC GCGGTTCGGA CAGCCGGAAA TAAAAATTGG CGTCATGCCT
GGCGCAGGTG GTACACAACG CCTGACCCGC GCCGTAGGTA AAGCCCTGGC CATGGAAATG
GTATTGACAG GTCGCTTTAT CACTGCACAA GAAGCTGCAC GTGCAGGTCT TATCAACCGG
GTAATACCGG TGGAACTTTT CCTGCAGGAA GCCATCCGGC TGGCGACTGA AGTAGCTGCG
CTTAGTCCGT TGGCAGTAAA GATGGCTAAA GAATCTGTAC TGAAAGCATT TGATAGCTCC
CTCGAAGAAG GACTACATTT TGAACGTAAA AACTTTTATC TGCTGTTTGC CTCTGAAGAT
CAGAAAGAAG GCATGCAGGC TTTTGTTGAT AAGAGATCAC CTGTTTTTAA AGGAAAATAA
 
Protein sequence
MQPQFIIIHR QVAPYVAHIQ LNRPKELNAL NLELMIELRD ALKMLDADDN VRAIVISGNE 
KAFAAGADIK QMAGKTAMDM YNIDQFSTWD TIKKTKKPLI AAVSGFALGG GCELVMLCDM
IVASETARFG QPEIKIGVMP GAGGTQRLTR AVGKALAMEM VLTGRFITAQ EAARAGLINR
VIPVELFLQE AIRLATEVAA LSPLAVKMAK ESVLKAFDSS LEEGLHFERK NFYLLFASED
QKEGMQAFVD KRSPVFKGK