Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6304 |
Symbol | |
ID | 8362486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7943978 |
End bp | 7944757 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644968431 |
Product | Enoyl-CoA hydratase/isomerase |
Protein accession | YP_003125910 |
Protein GI | 256425257 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.709567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACCAC AATTTATAAT CATACACCGG CAGGTAGCCC CATATGTGGC TCATATACAG TTAAACCGCC CCAAAGAACT CAATGCACTG AACCTTGAAC TGATGATTGA GCTCAGGGAT GCATTAAAAA TGTTGGATGC GGATGACAAT GTTCGTGCAA TCGTCATCAG CGGTAATGAA AAAGCATTCG CTGCAGGCGC GGATATCAAA CAGATGGCGG GGAAAACTGC CATGGACATG TATAACATTG ACCAGTTCAG CACCTGGGAC ACAATAAAAA AAACTAAAAA GCCGTTGATT GCGGCAGTAA GCGGCTTCGC GCTGGGAGGG GGATGTGAGC TGGTGATGCT ATGCGATATG ATAGTAGCCA GTGAAACAGC GCGGTTCGGA CAGCCGGAAA TAAAAATTGG CGTCATGCCT GGCGCAGGTG GTACACAACG CCTGACCCGC GCCGTAGGTA AAGCCCTGGC CATGGAAATG GTATTGACAG GTCGCTTTAT CACTGCACAA GAAGCTGCAC GTGCAGGTCT TATCAACCGG GTAATACCGG TGGAACTTTT CCTGCAGGAA GCCATCCGGC TGGCGACTGA AGTAGCTGCG CTTAGTCCGT TGGCAGTAAA GATGGCTAAA GAATCTGTAC TGAAAGCATT TGATAGCTCC CTCGAAGAAG GACTACATTT TGAACGTAAA AACTTTTATC TGCTGTTTGC CTCTGAAGAT CAGAAAGAAG GCATGCAGGC TTTTGTTGAT AAGAGATCAC CTGTTTTTAA AGGAAAATAA
|
Protein sequence | MQPQFIIIHR QVAPYVAHIQ LNRPKELNAL NLELMIELRD ALKMLDADDN VRAIVISGNE KAFAAGADIK QMAGKTAMDM YNIDQFSTWD TIKKTKKPLI AAVSGFALGG GCELVMLCDM IVASETARFG QPEIKIGVMP GAGGTQRLTR AVGKALAMEM VLTGRFITAQ EAARAGLINR VIPVELFLQE AIRLATEVAA LSPLAVKMAK ESVLKAFDSS LEEGLHFERK NFYLLFASED QKEGMQAFVD KRSPVFKGK
|
| |