Gene Cpin_6294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6294 
Symbol 
ID8362476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7929829 
End bp7930914 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content45% 
IMG OID644968421 
Producthypothetical protein 
Protein accessionYP_003125900 
Protein GI256425247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTA AAATAAAGGT AAAGGGCATT GGTATACGTA TACTGATCAC CGTGGTTTGC 
ATCTTGTTGC TGCACACTCT TTTCGCATTC AGCCATAGGT TTGCTGAGTT TTATTTTCAT
AGGTTATACG TTTGGATCAG TTTACTACTC CGGAAGGTAC TGGGGAAAGT TCCTTTCAGT
ATCGGCGACG TAATTTATGC CGCCTGGATT ATTACTTCGG TCATTTACCT GTTAAAGATA
TGTTATAAAA TTTTAAAAAA GCAATGGAAG CTTTTAGGAA TACAGTTTCT ACAGGGGATT
CAGGCATTAT TATCTGTCTA TCTGATATTT ATGTTATTCT GGGGATACAA CTACGACAGG
AATTCCCTGG AAAGTGATCT CTCCCTGGAA GTCAATGAAT ATAATGCCGA TCAGTTATAC
CGGCTGACCG ATACTTTGTT GCAACAGGTA AATCAGTATA AAAGCGCCCT GGGGGATACC
GTTCACGCTA CTCACCCGGG TGCTGACAGT GCCGCCATGT TCAGTCAGGC CATAAATGCC
TATGAGGCAG CCGTGGAAAA ATGGCCCGGA CTACGTTATA ACAGCCCCTG TATCAAACCT
TCTTTATACG GTCACTGGAT CAATTATATG GGGGTGGGTG GTTATCTGAA CCCCTTCACC
GGCGAAGCCC ATGTCAATGT TACGACGCCC GGATTCCTCC AGCCATTCAC CATTTGTCAT
GAAGTAGCAC ACCAGCTGGG ATACGCCCCG GAGGAAGAAG CAAACTTTGT TGGCTATCTT
GTGGCAGGGA ATTCGCCTGA TATTCATTTC AGATATGCCG CTAACTTTGA GATGTTTATG
TATAGTGTCA GACAATTACG CCGGCAGGAT ACCACCCTCG CCGGGGAGCT CTGGCGGAAG
GCTGTGCCAG GTATAAGGGC CGATATGCGG CAGATCAGGG ACTTCTATGA CCAATACCGC
AGTCCTGTGG ATGATTATAC GGCCATGATC TATGACCAGT ATCTTAAAGC GAACAATCAG
GAAAAAGGCA TCCGCAGCTA CAGTGAAGTA GTCGGCTGGC TAATTGCTTA TTTCAAGATC
AGATAA
 
Protein sequence
MDFKIKVKGI GIRILITVVC ILLLHTLFAF SHRFAEFYFH RLYVWISLLL RKVLGKVPFS 
IGDVIYAAWI ITSVIYLLKI CYKILKKQWK LLGIQFLQGI QALLSVYLIF MLFWGYNYDR
NSLESDLSLE VNEYNADQLY RLTDTLLQQV NQYKSALGDT VHATHPGADS AAMFSQAINA
YEAAVEKWPG LRYNSPCIKP SLYGHWINYM GVGGYLNPFT GEAHVNVTTP GFLQPFTICH
EVAHQLGYAP EEEANFVGYL VAGNSPDIHF RYAANFEMFM YSVRQLRRQD TTLAGELWRK
AVPGIRADMR QIRDFYDQYR SPVDDYTAMI YDQYLKANNQ EKGIRSYSEV VGWLIAYFKI
R