| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6290 |
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| Symbol | |
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| ID | 8362472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7923807 |
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| End bp | 7924484 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968417 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_003125896 |
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| Protein GI | 256425243 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.418922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTTA ATTTACCCGC TTTTCAGAAA ATAAACGAAC AGCTAAAGCC ATATAATGCA
AAGCTGGTAG CTGTATCCAA GATCAAACCA GCCTCAGATA TACAGGCGCT GTATGATGCC
GGTCAGCGTA TCTTCGGAGA AAATTATGTA CAGGAATTGC AGGAGAAACA ACCCTTGCTG
CCTGCTGATA TCGAATGGCA TTTCATCGGA CACCTGCAAT CCAATAAAGT AAAATACATC
GCGCCTTTCG TTAGTATGGT GCACGCGGTG GATAGTCTGA AACTACTGGA AGAAATCAGT
AAACAAGCGG CTAAGCATAA CCGTATGATC CGTTGTCTCC TGCAGGTGCA TATTGCTACC
GAAGAGACAA AATTCGGTCT GGATGAAAAG GAGTTGCTGG AACTGCTGGA AGCATATAAA
CAACAGGAAG CACGCTTTGC AAATATCCGG ATCGCGGGTC TTATGGGAAT GGCAACAAAT
ACAGATGACA TGCAGCAGGT ACGTAATGAA TTCCGACATC TGCATGCACT GCAACAAAAC
ATGAAGCAAC GCTTTTTCTC CGATACAGAC GCCTTGACGG AACTATCTGT AGGCATGAGC
GGAGACTACA CTATCGCCCT GGAAGAAGGT AGTACCATGG TACGTATCGG CAGTATGCTT
TTCGGCGCAA GATACTAG
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| Protein sequence | MSVNLPAFQK INEQLKPYNA KLVAVSKIKP ASDIQALYDA GQRIFGENYV QELQEKQPLL
PADIEWHFIG HLQSNKVKYI APFVSMVHAV DSLKLLEEIS KQAAKHNRMI RCLLQVHIAT
EETKFGLDEK ELLELLEAYK QQEARFANIR IAGLMGMATN TDDMQQVRNE FRHLHALQQN
MKQRFFSDTD ALTELSVGMS GDYTIALEEG STMVRIGSML FGARY
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