Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6282 |
Symbol | |
ID | 8362464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7917501 |
End bp | 7918154 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968409 |
Product | hypothetical protein |
Protein accession | YP_003125888 |
Protein GI | 256425235 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0309056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATTAT TTACTACACT GCTGTTACTC ACAGGCTTTA TGGCAAAAGC GCAGTCAGAG GACTGGCAAC AGCCGTTAAA AGCGGAGATC AGGCAACTGG AAGCGACCAG TGATTTCGAT ACCTGGCAAC AGGGTGCAGA GAAACTAGGC AAGCTGGCAG CGGCACATCC GGAGGAATGG CTGTTACAAT ACTACACCGG CTGGGCGTAT ACGCAGTCGT CTTTCCGGGC GCCAAAGGGA CAGGCAGATC CTACCACGGA GAAAGCTGAA CCTTTTGTGA AAAAAGCACT GGATCTGCAA CCTGAAAATA CAGAAACACT GACACTGATG GCTTACTGGC TATCCGCCCG TATCAATGCC AACAATTCCA GGGGAGTTAC GCTTGGCGGA GACAGCCGTA ATTATTCCGA TAAGGCCATT GCAGCCGATA GCGCTAATCC CCGGGCTTAT CTGATGAAAG CCCTTATCAT TTACCATACT CCAGCCCTGT TTGGTGGCGG TAAAAAGAAG GCTGCACCTA TTGCAGAAGA AGCAGGACAA CGTTTTGCCG TTTTTAAGCC GAAAGACGAG CTTTCTCCCA GATGGGGAAA AGAGATCTTT CATGAACTGG AAGAACGGAT GCAAGGCCGT GAGAATGAGA AAGAGAATAA GTAA
|
Protein sequence | MRLFTTLLLL TGFMAKAQSE DWQQPLKAEI RQLEATSDFD TWQQGAEKLG KLAAAHPEEW LLQYYTGWAY TQSSFRAPKG QADPTTEKAE PFVKKALDLQ PENTETLTLM AYWLSARINA NNSRGVTLGG DSRNYSDKAI AADSANPRAY LMKALIIYHT PALFGGGKKK AAPIAEEAGQ RFAVFKPKDE LSPRWGKEIF HELEERMQGR ENEKENK
|
| |