Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6281 |
Symbol | |
ID | 8362463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7916512 |
End bp | 7917357 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644968408 |
Product | protein of unknown function DUF1080 |
Protein accession | YP_003125887 |
Protein GI | 256425234 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.221693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TATTCACGTG CGGGCTGCTG CTGCTCACAC TCTCAGGAAT GGCGCAAAAA AAGGCGAATA AGGGTTGGGT TCAGCTTTTC AATGGAAAGG ACCTGACAGG CTGGGATATC AAGATTAAAG GCCATGATCT GAATGATAAC TATGGAAACA CCTTCCGCGT AGAAGACGGA TTGCTGAAAG TACGCTATGA CCAGTACACC AACTTTAATG AGCAATACGG TCATATCTTT TATAATAAGA ACTATTCCGC CTATGTGGTT GTGGTGGAAT ACCGCTTTGT CGGCGAACAG GTAGCCGGTG GTCCCGGATG GGCGCTGCGC AACAGTGGTA TCATGCTACA GGGACAGTCG GCTGCCAGCA TGGGTAAAAA CCAGGATTTC CCGATCTCCC TGGAAGAACA GCTGTTAGGA GGAAATGGCA CGGATCCCCG TTCTACGTCT AACCTCTGTA CACCAGGTAC AAACGTAGTG ATGAATGGAA AACTGATCAC AGAACATTGT ATCTCTTCGA CTTCAAAAAC TTATGATGGT GAACAGTGGG TGCGGGCAGG TGCACTGGTA CTGGGCGATT CCGTCATTAA ACATTTCGTG TTTAATGATA CCGTAATCGT GTATAATAAA CCGCAGACCG GTGGTGGTAA CGTGGAAGAT GCGGATAGCA CGCTGGTAGC AGCAGGACGT CCGCTGAGAG AGGGTTCTAT CTCCCTGCAG AGCGAAAGCC ATCCCGTTGA TTTCAGGAAA GTAGAATTGT ATGACCTGTC TCCGTATGTA AACGATCCGG TAAAACTGGA AGCCGTTTTA AGACAACTAC AGAAACAGGG CATGAAGAAG AAATAA
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Protein sequence | MKKLFTCGLL LLTLSGMAQK KANKGWVQLF NGKDLTGWDI KIKGHDLNDN YGNTFRVEDG LLKVRYDQYT NFNEQYGHIF YNKNYSAYVV VVEYRFVGEQ VAGGPGWALR NSGIMLQGQS AASMGKNQDF PISLEEQLLG GNGTDPRSTS NLCTPGTNVV MNGKLITEHC ISSTSKTYDG EQWVRAGALV LGDSVIKHFV FNDTVIVYNK PQTGGGNVED ADSTLVAAGR PLREGSISLQ SESHPVDFRK VELYDLSPYV NDPVKLEAVL RQLQKQGMKK K
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