Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6262 |
Symbol | |
ID | 8362444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7891172 |
End bp | 7892005 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644968390 |
Product | protease B |
Protein accession | YP_003125869 |
Protein GI | 256425216 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0777817 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAAC ACACATTAAC AGCACTCGCA TGCCTGCTGG CAGGAGCCGC TATCTGCATT GTTTCCTGTA AAAAGGATAC CACACCCTCT GCATCGGTTA ATCAGGCCGG TGTATCACAA GCTACCTTGG ATAAGATCAG TGCACTTGGT TTCAGCACTG CCGACGTCCG CAAATTCGAT GGTAAATATC TCGTGGAAGG AGATATCCTG CTGAGTGATG CAGACCTGAA CACCAAAGCA AACAGTCCTT TTCTAACCAC TGCCAAAGAA GAGCAATACC GCACCAATTA TGTGGTGACC GGTCTCCCAC GTCAAATAAC TGTAAGGGTT GCATCCAGCC TGGGTAGCGC TTTCGTAGCC GGTACGGATA CCGCTATCGC GCGTTATAAC AGACTGGGTC TTACGCTGAC TTTCAGACGT ATCACCAGCG GTACTGCCAA CATTACCATT TCCGGTTTTA ACCAGGGACC AAGTGGTGGT TTTATCACAC TCGGTTCTTC CGGTTTCCCA ACCAGTTCCG GTAATCCGTA CAACTCTATT CTTATGAATA CCAACTCCGC AGCATATGGC AGCAATCCGA ATGTGCTGTA TGTCGGTTCT GTTATTCAGC ATGAAATCGG TCACTGTATC GGCTTCCGTC ATACGGACTA CTTCAACCGT GCGCTCAGCT GTGGCGGTAC TGCTACCAAC GAAGGTTCAG CAGGTATCGG CGCTATCCTG ATTCCGGGTA CACCCAGCGG TAACAGCGCT AACTCCTGGA TGCTGGCCTG TTCTAATGGC GGCAACCGCA CCTTCAACGC AAATGATATC GTAGCACTCA ACTATCTGTA TTAA
|
Protein sequence | MSKHTLTALA CLLAGAAICI VSCKKDTTPS ASVNQAGVSQ ATLDKISALG FSTADVRKFD GKYLVEGDIL LSDADLNTKA NSPFLTTAKE EQYRTNYVVT GLPRQITVRV ASSLGSAFVA GTDTAIARYN RLGLTLTFRR ITSGTANITI SGFNQGPSGG FITLGSSGFP TSSGNPYNSI LMNTNSAAYG SNPNVLYVGS VIQHEIGHCI GFRHTDYFNR ALSCGGTATN EGSAGIGAIL IPGTPSGNSA NSWMLACSNG GNRTFNANDI VALNYLY
|
| |