Gene Cpin_6262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6262 
Symbol 
ID8362444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7891172 
End bp7892005 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content50% 
IMG OID644968390 
Productprotease B 
Protein accessionYP_003125869 
Protein GI256425216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0777817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC ACACATTAAC AGCACTCGCA TGCCTGCTGG CAGGAGCCGC TATCTGCATT 
GTTTCCTGTA AAAAGGATAC CACACCCTCT GCATCGGTTA ATCAGGCCGG TGTATCACAA
GCTACCTTGG ATAAGATCAG TGCACTTGGT TTCAGCACTG CCGACGTCCG CAAATTCGAT
GGTAAATATC TCGTGGAAGG AGATATCCTG CTGAGTGATG CAGACCTGAA CACCAAAGCA
AACAGTCCTT TTCTAACCAC TGCCAAAGAA GAGCAATACC GCACCAATTA TGTGGTGACC
GGTCTCCCAC GTCAAATAAC TGTAAGGGTT GCATCCAGCC TGGGTAGCGC TTTCGTAGCC
GGTACGGATA CCGCTATCGC GCGTTATAAC AGACTGGGTC TTACGCTGAC TTTCAGACGT
ATCACCAGCG GTACTGCCAA CATTACCATT TCCGGTTTTA ACCAGGGACC AAGTGGTGGT
TTTATCACAC TCGGTTCTTC CGGTTTCCCA ACCAGTTCCG GTAATCCGTA CAACTCTATT
CTTATGAATA CCAACTCCGC AGCATATGGC AGCAATCCGA ATGTGCTGTA TGTCGGTTCT
GTTATTCAGC ATGAAATCGG TCACTGTATC GGCTTCCGTC ATACGGACTA CTTCAACCGT
GCGCTCAGCT GTGGCGGTAC TGCTACCAAC GAAGGTTCAG CAGGTATCGG CGCTATCCTG
ATTCCGGGTA CACCCAGCGG TAACAGCGCT AACTCCTGGA TGCTGGCCTG TTCTAATGGC
GGCAACCGCA CCTTCAACGC AAATGATATC GTAGCACTCA ACTATCTGTA TTAA
 
Protein sequence
MSKHTLTALA CLLAGAAICI VSCKKDTTPS ASVNQAGVSQ ATLDKISALG FSTADVRKFD 
GKYLVEGDIL LSDADLNTKA NSPFLTTAKE EQYRTNYVVT GLPRQITVRV ASSLGSAFVA
GTDTAIARYN RLGLTLTFRR ITSGTANITI SGFNQGPSGG FITLGSSGFP TSSGNPYNSI
LMNTNSAAYG SNPNVLYVGS VIQHEIGHCI GFRHTDYFNR ALSCGGTATN EGSAGIGAIL
IPGTPSGNSA NSWMLACSNG GNRTFNANDI VALNYLY