Gene Cpin_6246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6246 
Symbol 
ID8362428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7871717 
End bp7871998 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content43% 
IMG OID644968374 
Productchaperonin Cpn10 
Protein accessionYP_003125853 
Protein GI256425200 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAG ATTTAAGTAT TAAACCCTTA GCTGACAGGG TGATCGTAAA ACCCGCAGCA 
GCTGAAGAGA AAACAGCTGG TGGTATCATC ATCCCAGATA CTGCAAAAGA AAAACCACAG
AGAGGTACTG TAGTTGCAGC AGGTCCTGGT AAGAAAGACG AGCCGGTAAC TGTAAAGGTG
GGAGATACCG TATTATATGG TAAATACTCC GGTACTGAGA TCAGCATTGA AGGTGGCGAC
TACTTAATCA TGCGTGAATC TGACATTTTA GCGATTGTTT AA
 
Protein sequence
MAQDLSIKPL ADRVIVKPAA AEEKTAGGII IPDTAKEKPQ RGTVVAAGPG KKDEPVTVKV 
GDTVLYGKYS GTEISIEGGD YLIMRESDIL AIV