| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6239 |
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| Symbol | |
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| ID | 8362421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7860761 |
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| End bp | 7863406 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968367 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_003125846 |
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| Protein GI | 256425193 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTTT CTAAAAATTT TACGCCTGCT GCTGCTGAAG GCAAATGGTA CCAGCACTGG
ATGGACAAAG GTTATTTCCG TAGTAAACCG GACAACCGTC CCCCCTTTAC CATTGTGATC
CCTCCTCCTA ACGTCACCGG TGTGCTGCAC ATGGGACATA CCCTGAACGA GACCGTCCAG
GATATCCTGG TGCGCCGTGC ACGTATGAGC GGATACAATA CCTGCTGGGT CCCTGGTTCT
GACCATGCGT CCATCGCAAC AGAGGCAAAA GTGGTGAACA TGCTCAAAAC CGAAAAAGGG
ATTGAGAAAT CACAGCTTAC CCGTGAAGAG TTCCTCAAAT ATGCATTTGA GTGGAAAGAT
AAATATGGTG GCATCATTTA TAACCAGATC AAAAAACTGG GATGCTCCTG CGACTGGGAC
AGGGTAACCT TTACCATGGA CGACCATTAC TATCAGGCAG TTATCAAAGT ATTCGTTGAT
CTGTATGGTA AAGGACTGAT CTATCGCGGC GCCCGTATGA TCAACTGGGA CCCGAAAGCA
AAAACAGCCC TGAGTGACGA GGAAGTACAG TACAAAGACA TCAACGGTAA ACTGTACCAC
GTTCAATACG CTATCACCGA TTCTGAAAAT AATCTTACCG GCGAAAGCAT CACCATCGCT
ACGCAACGTC CTGAAACCAT CATGGGCGAT ACCGCTATCT GCGTAAACCC TGATGATGAC
CGCTATAAAC ACCTGGCAGG TCACTTTGCC ATCGTACCAC TGGTTAACCG CAGAGTACCT
ATCATCTTCG ATACTTACGT AGATAAAGAA TTCGGTACCG GCGCCCTGAA AGTGACGCCT
GCTCACGATA TCAATGACTA TAACCTGGGT CTGAAACACA ACCTGGAAGT AGTTGATACC
CTGAACGATG ATGGTACCCT CAGCCCTGCT GCCGGCGTAT TCATCGGTGA AGACCGCTTC
AAAGCCCGTA AAAAGGTGAT CGCTGCACTC GACGAACAAG GCATCCTCGT TAAAGAACAG
GAATACACCA CCCGTCTCGG CTACAGTGAG CGCAATCCTG ATACTGTGGT AGAACCGCGT
ATCAGTACCC AGTGGTTCGT GAAGATGGCA GAACTGGCTA AACCTGCCCT GGACGCAGTA
GTAGACGGAA ACGTAAAGAT CCACCCGGGC GACCGTTTCC TCGCTACCTA CAAATACTGG
ATGGAGAACG TAAAAGACTG GTGTATCTCC CGCCAACTCT GGTGGGGACA GCAGATCCCC
GCTTTCTATG CACCTGATGG CACATTCGAA GTAGCGCAGA ACGTAGATAC CGCCATCGCC
CAGTTCAAAG CGAAAGGCGC TACCTACACA GCCGCTGACC TTCGTCAGGA CGAAGACTGT
CTGGATACCT GGTTCTCTTC CTGGTTATGG CCAATGGAAG TATTCAATGG TATCTCCCAG
CCAGACAATG AAGAAATCAA TTACTACTAC CCCACCAACG TACTGGTAAC CGGACAGGAT
ATCATCTTCT TCTGGGTAGC CCGTATGATC ATGGCAGGTC AGGAATACAG AAACGAAAAG
CCATTCAGTG ATGTATACTT CACTGGTATG GTAAGAGATA AACAAGGTCG TAAAATGAGT
AAACAGCTGG GTAACTCCCC CGATCTGCTG GAACTCATTG ATAAATACGG TGCTGATGCC
GTTCGTTATG GCATCATGAT TTCTTCTCCT GCAGGTAATG ACCTGCTGTT TGATGACGCA
GCACTGGAAC TGGGTAGTAA ATTCAGCAAC AAGATCTGGA ACGCCCTGAA ACTGGTGAAA
ATGTGGGAAG CGAATACTGC CGGCGATGCC AATGCCGCGG TTGACCATTT CGCAGTAAGA
TGGTTCGAAA GCAGACTCAA TGAAGTAAAA GTACAGCTGG CGGAAGAGTT TGCGGACTTT
AAGCTGAATG AAGCCCTGAA AACAGTACGT AGCCTGATCT GGGATGATTT CTGTAGCTGG
TACCTGGAAT GGGTAAAACC TGGTTTCGAA CAACCTTGCG ATGCAGGTAT CTATGCGAAA
ACCGTTTACT TCTTCGAAGA ACTGATGCAG TTACTGCACC CATTCATGCC ATTTGTGACA
GAAGAAGTTT ATCAGTTACT GAAAGAACGT GCAGCTGGCG ATGACCTGAT CATCAGACAG
TATAGCGCTC CTGGTACGAT TGATGCCAAT ATGCTTGCAG AAGGCGAACT GGCTAAAGAA
GTGATCACCA GCATCCGTGA CTCACGTAAC AAACATCAGA TCAAGCCAAA AGAAGAAATT
GTACTGCATA TCGATACCCT GCAGGAAGCC GCCTTCAAAC AGATCGAAGG TATGCTCTCC
AAACAGGTAA ACGCGAAAGC AATCAACTAC ACCAAAGAAC CGGTAGCTGG CTGTATCACA
TTGGTAGTGC AGAAAGACAA ATTCTACCTG GGTACGGAAA CCGTTGTAAA TACCACCGCC
CAGAAAGAAG AGCTGGAGAA AGACCTGGCT TATCTGCAAG GCTTCCTGGT ATCAGTTGAG
AAAAAACTGA GCAACGAAAA GTTTGTTCAG AATGCAAAAC CGGAAGCGGT AGAGATAGAA
CGAAATAAGA AGAAAGACGC TGAGGCAAAA ATTGCCGCCA TTACGGAAAG TTTGAAATCA
CTATAA
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| Protein sequence | MELSKNFTPA AAEGKWYQHW MDKGYFRSKP DNRPPFTIVI PPPNVTGVLH MGHTLNETVQ
DILVRRARMS GYNTCWVPGS DHASIATEAK VVNMLKTEKG IEKSQLTREE FLKYAFEWKD
KYGGIIYNQI KKLGCSCDWD RVTFTMDDHY YQAVIKVFVD LYGKGLIYRG ARMINWDPKA
KTALSDEEVQ YKDINGKLYH VQYAITDSEN NLTGESITIA TQRPETIMGD TAICVNPDDD
RYKHLAGHFA IVPLVNRRVP IIFDTYVDKE FGTGALKVTP AHDINDYNLG LKHNLEVVDT
LNDDGTLSPA AGVFIGEDRF KARKKVIAAL DEQGILVKEQ EYTTRLGYSE RNPDTVVEPR
ISTQWFVKMA ELAKPALDAV VDGNVKIHPG DRFLATYKYW MENVKDWCIS RQLWWGQQIP
AFYAPDGTFE VAQNVDTAIA QFKAKGATYT AADLRQDEDC LDTWFSSWLW PMEVFNGISQ
PDNEEINYYY PTNVLVTGQD IIFFWVARMI MAGQEYRNEK PFSDVYFTGM VRDKQGRKMS
KQLGNSPDLL ELIDKYGADA VRYGIMISSP AGNDLLFDDA ALELGSKFSN KIWNALKLVK
MWEANTAGDA NAAVDHFAVR WFESRLNEVK VQLAEEFADF KLNEALKTVR SLIWDDFCSW
YLEWVKPGFE QPCDAGIYAK TVYFFEELMQ LLHPFMPFVT EEVYQLLKER AAGDDLIIRQ
YSAPGTIDAN MLAEGELAKE VITSIRDSRN KHQIKPKEEI VLHIDTLQEA AFKQIEGMLS
KQVNAKAINY TKEPVAGCIT LVVQKDKFYL GTETVVNTTA QKEELEKDLA YLQGFLVSVE
KKLSNEKFVQ NAKPEAVEIE RNKKKDAEAK IAAITESLKS L
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