| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6237 |
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| Symbol | |
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| ID | 8362419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7858025 |
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| End bp | 7858882 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968365 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003125844 |
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| Protein GI | 256425191 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.771821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCAAC TTAAAATTGC CACCCAGATC ACAAACCGTG ATTCGCAGGC GGTAGAAAAA
TACCTGCAGG AGATTTCAAA GATCCCTTTG TTAACACCTG AGGAAGAGAC CGTTTTGGCG
CAGCGCATTA AGATGGGTGA CCAGAAGGCT CTTGAACGTT TAACTACAGG AAACCTTCGT
TTCGTAGTAT CAGTAGCAAA GCAATATCAA CACCAGGGCT TAAGCCTCAG CGACCTCATT
AACGAGGGCA ATTTAGGGTT GATCAAGGCT GCGCAGAGAT TCGATGAAAC GAAAGGGTTC
AAATTCATTT CTTATGCTGT TTGGTGGATT CGTCAATCCA TACTACAGGC TTTAGCAGAA
CAGGGCCGTC TGGTTCGTCT GCCGCAGAAT AAAATCGGCA CTTACAATAA AGCTAACAAA
GCCTACATGG CATTTGAACA GGAGAATGAA AGAGAACCTT CAACAGAAGA GTTAGCAGAG
ATCCTGGAAA TGTCTGAATC AGAGATCAAC AATATCTTCC AAAGCAATAC CCGTCACATG
TCATTGGATG CTCCGGTTCA CGAAGCAGAA GATGTGGCAA TGGGGGACCT GCTGGAAGGT
GGCGATATCA CTGATGATGA TGTGATGCGT GATTCACTGC GTGAAGAGAT CCGTCGTGTG
CTGAAATCAC TCAGCCCTCG TGAAGCGGAG ATCGTAAACG CATACTTTGG TCTGGATGGA
GAGAATGGAG CAACGATCGA ACAAATCGGT CAGAAATACG ACCTGACAAA GGAAAGAATT
CGTCAAATCA AGGAACGCGC CATCAAAAGG CTGCAAAAAG CCCGCTACAG CGGAGCACTG
AAATCTTACC TGGGTTAA
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| Protein sequence | MRQLKIATQI TNRDSQAVEK YLQEISKIPL LTPEEETVLA QRIKMGDQKA LERLTTGNLR
FVVSVAKQYQ HQGLSLSDLI NEGNLGLIKA AQRFDETKGF KFISYAVWWI RQSILQALAE
QGRLVRLPQN KIGTYNKANK AYMAFEQENE REPSTEELAE ILEMSESEIN NIFQSNTRHM
SLDAPVHEAE DVAMGDLLEG GDITDDDVMR DSLREEIRRV LKSLSPREAE IVNAYFGLDG
ENGATIEQIG QKYDLTKERI RQIKERAIKR LQKARYSGAL KSYLG
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