| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6230 |
|---|
| Symbol | |
|---|
| ID | 8362412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7852115 |
|---|
| End bp | 7852585 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644968358 |
|---|
| Product | pantetheine-phosphate adenylyltransferase |
|---|
| Protein accession | YP_003125837 |
|---|
| Protein GI | 256425184 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0669] Phosphopantetheine adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR01510] pantetheine-phosphate adenylyltransferase, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.538241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTA TTTGCTTATT CCCGGGCACT TTTGATCCGA TCACGCTTGG GCATACGGAT
GTTATAGACC GTTCGCTGGA CCTTTTCGAT GAAATAGTAG TAGGTGTTGG CGTGAATGCT
GCCAAGACGC CGATGTTCCC CCTGGAACAG CGTATACAAT GGATCCGTGA GATCTATAGC
GACAGGCCGA AGGTAAGAGT GATCTCTTAT GAAGGACTGA CAGTGAACAC CTGTAAAGAG
ATCGGCGCGC AGTTTATTTT GCGCGGCATC CGCAGCATTG GCGACTTCGA ATATGAGAAA
GCGATCGCTG ATGTGAACAG GATGATGGAT GAAAATATCG AGACTATTTT TCTGAGCTGT
TCGCCCCGTT ATTCCACACT GGCTTCTTCG CTGGTGAGGG ATGTGCTGCG TTATGGCGGC
GATGCTTCCC AGCTGTTGCC GGCCAATATT ATCAGGCAGC TCAAAGCATA A
|
|---|
| Protein sequence | MKRICLFPGT FDPITLGHTD VIDRSLDLFD EIVVGVGVNA AKTPMFPLEQ RIQWIREIYS
DRPKVRVISY EGLTVNTCKE IGAQFILRGI RSIGDFEYEK AIADVNRMMD ENIETIFLSC
SPRYSTLASS LVRDVLRYGG DASQLLPANI IRQLKA
|
|---|
| |