| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6216 |
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| Symbol | |
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| ID | 8362398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7838777 |
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| End bp | 7839343 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644968344 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003125823 |
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| Protein GI | 256425170 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGCAT CAGCCAACAA CTTGAACAAT ACATCCATAA CAGACCACCT GGTGTCCCGG
TGTAAGAAAG GAGACACGCT CGCATTCCGT GAGTTATACA ATGCATATTC TGCTGCAATG
TATAACATCT GTCTGCGTAT GACGGGGAAT CCGGCAGATG CCGAAGATAC CTTGCAGGAG
GCTTTTATGC AGGTGTTTAA AAATATAGAA CGGCTTGAAA ACGCGGGCAG CGTCACAGCA
TGGATCAAAC GAATAGTTGT GAACCATTGT CTGAGCCACC TGCGTAGAAA GAAAGTATAT
TTTGAAGAAG TAGACAATAT AGACGTAGAA GAAGAAACAA TCGTAGACGA ATCAGATTTT
GCCTGGACGG TAGCTGCGAT AAAGGAGGCG ATACACGTTT TGCCTCACGG CTATCGTACC
GTTCTTAACT TGTACATATT TGAAGAGTAC TCACATAAAG AAATTGCTTC CATGCTGGAC
ATTTCTGAGT CAACAGTGAA AACACAGTAT ATGCGTGCAA AAGATAAAGT GAGACAGATC
ATAAAACAGA GAAAATCAAT ACGCTGA
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| Protein sequence | MQASANNLNN TSITDHLVSR CKKGDTLAFR ELYNAYSAAM YNICLRMTGN PADAEDTLQE
AFMQVFKNIE RLENAGSVTA WIKRIVVNHC LSHLRRKKVY FEEVDNIDVE EETIVDESDF
AWTVAAIKEA IHVLPHGYRT VLNLYIFEEY SHKEIASMLD ISESTVKTQY MRAKDKVRQI
IKQRKSIR
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