| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6213 |
|---|
| Symbol | |
|---|
| ID | 8362395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7836379 |
|---|
| End bp | 7837113 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644968341 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_003125820 |
|---|
| Protein GI | 256425167 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT TACGTTTAAA CTGGGTACTG CCAGTAGCAC TATTGCTGTT CACTATCACC
GCATCTGCCT TTAATGTCCT CAATGAAAAA GTAAAGGGGA GCGGTAACAT TAAATCAGAA
GCCCGTACGG AAGGACCATT CAGGAGTATC AGCACTTCAG GTTCCTATAA CGTGTATATC
ACGCCTGGTG CTAAAAACGA TATCAGAATT GAAGCAGATG ATAACCTGCT GCCATATATC
GAGACGAAGC TGAGAGGGAA TGATCTGGAG ATCGGTACAA AAAGAGGATA TGATATCAAG
CCATCTAAAA CCATCAATAT ATATGTGACC CTGGATCAGC TGGAAGAATT AAATTCCAGC
GGTAGCGGCG GATTTTACAG CAAAGGCAAA CTGAAGGGAA ATAGTGTGAA ATTCTCTTTC
AGTGGTTCTA CCAATACAGA GCTGGAGCTG GATGCCAGCA ACCTGGCAGT AGAAGTGTCT
GGTTCCAGTC ACCTGAACCT GAAAGGACAT ATTCCATCCA CCAAATATGA GATCTCAGGT
ACTGCTGATG TGGAAGCACT GGAATTGCAG TCTTCCGACG CGAAGGTCTC TATTTCCGGT
ACCGGTAAAC TGGACATTGC TGTGGAGAAG AAGCTGGATG TGAGTGTTGC CGGTATGGGT
AAGATCCGTT ATAAAGGGTC ACCGGTGATC AACCAGTCCT CTTCTGGCAT GGCGAAGATC
ACTAAAGTTG ACTAA
|
|---|
| Protein sequence | MKTLRLNWVL PVALLLFTIT ASAFNVLNEK VKGSGNIKSE ARTEGPFRSI STSGSYNVYI
TPGAKNDIRI EADDNLLPYI ETKLRGNDLE IGTKRGYDIK PSKTINIYVT LDQLEELNSS
GSGGFYSKGK LKGNSVKFSF SGSTNTELEL DASNLAVEVS GSSHLNLKGH IPSTKYEISG
TADVEALELQ SSDAKVSISG TGKLDIAVEK KLDVSVAGMG KIRYKGSPVI NQSSSGMAKI
TKVD
|
|---|
| |