| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6201 |
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| Symbol | |
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| ID | 8362383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7823175 |
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| End bp | 7825553 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968329 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003125808 |
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| Protein GI | 256425155 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.180882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.205128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAA GATTACTTAT GCTGCTGGGC ATATGCCTGC TGCTTATGCA GGTAAGCTAT
GTACATGCGC AACAACGATA CACGATCAGT GGTTATGTAA AAGACCAGCA AAATGGTGAA
AGCCTTATCG GCATCACTGT AGCAAAGGCA GGCACCAGCC TGGGCACTGT AACCAATGAA
TATGGATTTT ACTCCCTGAC ACTCCCCGCA GGCGATCATG AGATCCAGTT CTCTTATATC
GGTTATGGGA CAATCAAAAT GAATGTTTCG CTGAAAGCTA ATAAGACGCT GGACATGAAA
CTGGAGAAAT CCAGTTCTCA GTTAAGCACC ATCACGGTAA GCGGTAATAA ACAAGAGAAA
GCAGTTAATA CACTGACGAC GAGTCTGAAC AGACTGGACA TCGCGCAGAT GAAAAAGATG
CCCACCTTTA TGGGTGAAGT CGATGTACTG CGTTCTATCC AGACCTTACC AGGTGTAAAC
ACAGTAGGTG AAGGCGCGAA TGGTTTTAAC GTACGTGGTG GAGCCGCTGA CGAAAACCTC
ATTCTGCTGG ATGAAGCCCC TGTATACAAC TCTACCCATA TGCTCGGCTT CTTCTCTGTA
TTCAATCCGG ATGCAGTAAA AACCATCAAT CTCATTAAAG GCGGTTTTCC GGCTGAATAC
GGCGGTCGTA CTTCTTCTGT ACTGGATATA CGCATGAAGG ACGGAAACAA CCAGAAATTC
AATGTAAATG GCGGTATAAG CAATGTATTC AGCAGAGTGG CAGTAGAAGG CCCGCTGAAG
AAAGATGAAT CTTCCTTCAT CATTGCAGCC CGTCGTTCTT ATATCGATAT CCTTATGAAA
CCTTTCCTGA AAGGGGACAT GAAAGATACC AAACTGAATT TCTACGATCT GACTGCAAAG
GTGAACTACA AACTGAACAA GAACAATACG CTCTTCGCCA GTGGTTACCT GGGCCGCGAC
GTATTCGGAT TCGGTACGCA GGTGAATATG AACTGGGGTA ATAAAACAGC GACTGTACGC
TGGAACCATG TGTTCACCAA CAAAACATTC CTGAACCTGA CTACTTTCTA TAGTAATTAC
GACTATACCC TGGATTTCAA TAATGAAAGT CAGAAAGGCG CGGGGGAAGA GTCACAGCGT
TACAAATGGA CGTCGAACAT CATCAACTAT GGTGTGAAAC CAGCCTTTAC TTACTACATT
AATACACACA ATAGCGTACA CTTCGGTCTG CAGGGACTCT ACTATACCTT CAAACCAGGT
ACGGGTACCG GTGTGGAAGG CGATGAAACT TCTGTAAAAG AACTCACGCA GCAGCATGGT
CTGGAAGCAG CCGCTTACCT GGATCATGAG TGGAAACCAA GCGACAAATT CGGCGTACAG
TATGGTGTGC GTTTGTCTTC TTACCAATAT CTCGGTAAAG GAACGGCCTA CTATTACAAC
GATACCACAC CAGGTATCCG CAGAACACTG ACCGGCACAA AACAATATGG CGCCAACGAA
CTGATCAAAG CGTACAGTTA CCTGGAACCA AGGATCACTG CCCGTTATGC ACTGACGCCG
AACCATGCCG TGAAAGCATC TTATGCACGT ACGACACAGT TCATGCACCA GTTGTCCAAC
ACCGCTTCTC CGACGCCGCT GGATATCTGG ACGCCAAGTA CCAACAATAT CAAACCACAG
GTAGCGGATC AGTATACGAT CGGATATGTA TATGATGCTC CTTCCGGCGT CTTCGAAATC
TCCGGTGAAG CGTTCTACAA GAACATGGAA AATCAGCTAG ATTATATCGA CAATGCCAAC
CTGGAACTGA ACCAGCAGAT CGAAGCAGAC CTCCTGCAAT CACACAGCCG TTCTTATGGT
CTGGAACTGA TGGCGAAGAA AGAAGTAGGT AAGACGACCG GATGGGTGAG TTACACACTG
TCCCGTTCCG AAAGACAAAC AACCGGTATC AGCAAAGATG AATGGTTCCT GAACCGTTAC
GACCGTACAC ATAACCTGAA CCTGGTTATC ACACACGAGT TATCAAAACG CACCTCTCTT
TCCGCCAACT GGGTATATGC GTCAGGAACA CCGGCTACTT TTGCCGACAG CCGTCTGGAA
TTCCAGGACT GGGATATTCC TTACAACAGT ACTGACAAAC GTAACAACTA CAGACTGCCT
TCTTTCCACC GCCTGGATAT GTCGTTAACG TTAAAAGGAA AACAACTCCG TCGCTGGAAA
GGAGAATGGG TATTCTCACT CTACAATGTA TACGGCCGCA GAAATGCCTA CACCGTGTAC
TTCAGACAGA ACGAAGATGA TCCATCCAAA AAAGAAGCGG TTCGTCTTTC CATCATAGGT
TCTATCATCC CTGGTATCAC CTATAACTTC AAATTCTAA
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| Protein sequence | MKTRLLMLLG ICLLLMQVSY VHAQQRYTIS GYVKDQQNGE SLIGITVAKA GTSLGTVTNE
YGFYSLTLPA GDHEIQFSYI GYGTIKMNVS LKANKTLDMK LEKSSSQLST ITVSGNKQEK
AVNTLTTSLN RLDIAQMKKM PTFMGEVDVL RSIQTLPGVN TVGEGANGFN VRGGAADENL
ILLDEAPVYN STHMLGFFSV FNPDAVKTIN LIKGGFPAEY GGRTSSVLDI RMKDGNNQKF
NVNGGISNVF SRVAVEGPLK KDESSFIIAA RRSYIDILMK PFLKGDMKDT KLNFYDLTAK
VNYKLNKNNT LFASGYLGRD VFGFGTQVNM NWGNKTATVR WNHVFTNKTF LNLTTFYSNY
DYTLDFNNES QKGAGEESQR YKWTSNIINY GVKPAFTYYI NTHNSVHFGL QGLYYTFKPG
TGTGVEGDET SVKELTQQHG LEAAAYLDHE WKPSDKFGVQ YGVRLSSYQY LGKGTAYYYN
DTTPGIRRTL TGTKQYGANE LIKAYSYLEP RITARYALTP NHAVKASYAR TTQFMHQLSN
TASPTPLDIW TPSTNNIKPQ VADQYTIGYV YDAPSGVFEI SGEAFYKNME NQLDYIDNAN
LELNQQIEAD LLQSHSRSYG LELMAKKEVG KTTGWVSYTL SRSERQTTGI SKDEWFLNRY
DRTHNLNLVI THELSKRTSL SANWVYASGT PATFADSRLE FQDWDIPYNS TDKRNNYRLP
SFHRLDMSLT LKGKQLRRWK GEWVFSLYNV YGRRNAYTVY FRQNEDDPSK KEAVRLSIIG
SIIPGITYNF KF
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