| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6191 |
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| Symbol | |
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| ID | 8362373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7809977 |
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| End bp | 7811647 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644968319 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_003125798 |
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| Protein GI | 256425145 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.387817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.348092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGGA ACCGATTTTG GATATTTTTC GGATGTGCCA TCTTCCTGGG GACTATCCTA
CTTTACGCGA CGAACCGACC TCTTATTGGC AAAAAACAAA ATCCTCCGCT CAGGACCATC
ATTATCGATC CAGGCCATAG TGCGCAGACA CCTGGCGCCC GTGGCAAGTT TTCTACCGAA
GAAGGTGTAG TGCTGGACGT GGCCCTGAAA CTGGGGAAGA TCATCGAGGA AAACATGAAG
GACGTACGTG TAGTATATAC GCGTAAGACC AGGAACGCCC TGGGCTCCAC CCTCCGTGCC
GACCTGAATG AAAGAGCGAT TATCGCCAAC AGGGAAAAAG GAGACCTTTT TATTTCAATT
CACTGTAACT CAGCAGGTCC TACCCGTAGA GTGACCGGCT ACAAAACCGT CTATATCAAG
AAAGGTAAAA AGAAAGTGCC CGTAAAAAGA GCCATCTATG CTACCTCACC AAGCACCGCC
CAGGGTACCG AAACCTATGT ATGGGCTACC GGTAAGAACA ATGCCAAAAC AGAATCACTG
AAAGAAAGCT CCGTAATCAT GCTGGACGCC AACTCGGAAG ATGCGAATTC CGTATTGGAT
ATGTCTGATC CTGAAACCTT TATATTATTA AATACCCTTC GTAACGCCTA TTTCGACCAG
AGCCTTCGCC TGTCTACCCT CATTGAAGAC GAATTCACCA ATGTAGGCCG TATCAGCCGT
GGCGCCCGTC AGCGTGATGA AAAAGGTATC TGGGTCCTCC AGGCTACCGC CATGCCAAGC
GTACTGGTGG AACTGGGCTT TATCAGCAAT CCGGAAGAAG AAGACTACCT GAACTCCGAC
AAAGGACAAC AGGAAGCCGC TGCCTGTATC TTCAAAGCCA TCAAACGTTA TAAAGATGAA
CTGGGCCGTT ACAGCGCGCC CGAAGACAGG CAGTCTGCCG CTCCCGCTTC CTCCGAACAG
TCCACTCCTG TCAGCTACCG CTCCCCTAAA TCCAGGAGCA ATGATGCCCG GAATGCGGTA
GCAGCCACAA AAACAAAGAC CCCGGCGGCA GTTGCATCCA GCTCAAAGAA CAAAACAGCT
ACCCGTCAGG TAGCTGTCCG GAAAGAACCG GAAGCGCCCG CCTATAAATA TGATATCCAG
CTGCTCGTCA GTGACAAAAA GTACACCCGG GACGCCGCTA TCTTTAATAA ACTAAGGGGA
ACCATCCGAA AAGAACAGCT GGTCGCCAAC AGTAAAAAGA TCAATAAGTA TAAATATATA
TGGGGCAGTT TCCGGTCCCA GGCAGAAGTC AATGCTGCTT TGCGTCAGGC AAAGCAGCTT
GGCTTCCGGA AAGCGGTCCT GGTAGGACAG AGCAGTACCA AAGGCCAGCT GGCAGCAGCC
GGATCTGCTC CCGCTGCTAT CCCTTCTATT CCTAAAGTCA GCTTTAAATA TGATATACAG
CTGGTCGTTA CCGATAAAAA ATATACCCGC AGCGCTCCCG TCTTCAAAGA CTTACGCGGC
ACGATCGTCC GGGTGTCAGT CGTCATCAAC CGCAAAACCC TTAATAAATA TACCTGGGTG
AACTTCAAAA CCGAAAAAGA AGCCAACATC GCACTCAGCA AAGCAAAAAA AGCAGGCTTC
TGGAACGCCA CCGTAGTAAC CGCAGATAAT AACCGTATCG CCAGCAGATA A
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| Protein sequence | MRWNRFWIFF GCAIFLGTIL LYATNRPLIG KKQNPPLRTI IIDPGHSAQT PGARGKFSTE
EGVVLDVALK LGKIIEENMK DVRVVYTRKT RNALGSTLRA DLNERAIIAN REKGDLFISI
HCNSAGPTRR VTGYKTVYIK KGKKKVPVKR AIYATSPSTA QGTETYVWAT GKNNAKTESL
KESSVIMLDA NSEDANSVLD MSDPETFILL NTLRNAYFDQ SLRLSTLIED EFTNVGRISR
GARQRDEKGI WVLQATAMPS VLVELGFISN PEEEDYLNSD KGQQEAAACI FKAIKRYKDE
LGRYSAPEDR QSAAPASSEQ STPVSYRSPK SRSNDARNAV AATKTKTPAA VASSSKNKTA
TRQVAVRKEP EAPAYKYDIQ LLVSDKKYTR DAAIFNKLRG TIRKEQLVAN SKKINKYKYI
WGSFRSQAEV NAALRQAKQL GFRKAVLVGQ SSTKGQLAAA GSAPAAIPSI PKVSFKYDIQ
LVVTDKKYTR SAPVFKDLRG TIVRVSVVIN RKTLNKYTWV NFKTEKEANI ALSKAKKAGF
WNATVVTADN NRIASR
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