| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6189 |
|---|
| Symbol | |
|---|
| ID | 8362371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7806138 |
|---|
| End bp | 7806893 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644968317 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_003125796 |
|---|
| Protein GI | 256425143 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.281848 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGC TTACGAACCT CCTGGCCAGG TTATACGCTA CTTATGCATT GATCGTCTTT
ATCTGCACTA TGCTGATCAT GCTGCTGCCT ATGTGGCTGG TCTCATTACT TCCTGGACCC
AGGAATATCC GTTATTTCAT GACCCTCGGA CGGGCCTGGA TGCATGTATA CATGCCATTG
ATCTTTTGTC CGGTAAGGGT GAAAGGCAAA GCATACTTCG ATTCCGATCA GCCCTACATC
ATCGTGTGTA ACCACAATTC CATGATGGAC GTTCCCACCA CTACCTACGC CATTCCTGCT
GCCAGCAAGA GCCTGGCCAA AGAAGAAATG AAGAAGGCGC CTATCTTCGG TATCATGTAT
AAGGTAGGTT CCGTGCTGGT GAACAGGCAT GATCCGGAAA GCCGGAAACG TAGCGTAGCA
GAAATGAAAG AAGTGCTCAG CGACGGCGTA CACATGCTGT TATACCCGGA AGGTACGCGT
AACAAAACCG ACGATCCGCT GAAATCTTTC TACGACGGCG CATTTACACT GGCCATCGAA
ACCCACAAAC CGATCCTGCC GGCCGTTATT TTTAATACGC GTAAGATTAT GCCGCCGGGG
AAAGTATTTT ATGCCCTTCC GCACGCAATA GATATTCATT TTCTGGCGCC GGTGGATACG
ACAGCACTGA CATCCGCTGA TCTGGAATCA TTAAAAGAAA GGGTGTTTAA AACGATGTGG
GAGCATATCG AACAACACTG GAAACAAAAA GCATAA
|
|---|
| Protein sequence | MKWLTNLLAR LYATYALIVF ICTMLIMLLP MWLVSLLPGP RNIRYFMTLG RAWMHVYMPL
IFCPVRVKGK AYFDSDQPYI IVCNHNSMMD VPTTTYAIPA ASKSLAKEEM KKAPIFGIMY
KVGSVLVNRH DPESRKRSVA EMKEVLSDGV HMLLYPEGTR NKTDDPLKSF YDGAFTLAIE
THKPILPAVI FNTRKIMPPG KVFYALPHAI DIHFLAPVDT TALTSADLES LKERVFKTMW
EHIEQHWKQK A
|
|---|
| |