| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6188 |
|---|
| Symbol | |
|---|
| ID | 8362370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7805294 |
|---|
| End bp | 7806037 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644968316 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003125795 |
|---|
| Protein GI | 256425142 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.19766 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATT CTACCCTTTT ACTAAAAACG GTCCTGTTTT TTATACTGGT GCTGGCAGGC
GGAATCGCCA CAGCGCAGGT ACGGGTATAC GGTACAGTAT ACGATCGTTC CGGCCGTTTT
GGTATGCCCT ATGTCAGCGT TATGAGTTCC AGTGGCGGCG GTACCGTTAC CGACTCCCTG
GGTCGCTATA GCCTCAATAT GGCCCCTGCC GATTCCCTCA GCTTCTCCTA CCAGGGAAAA
GCCACCATGA AAATTCCGGT AGCGGAAATC CCGCGTAACC GTCCTTTCGA TACAAAAATA
CACGTAGACG TTACGACCCT GCCTACTGTT ATCGTGGAAG AAAAAAGAAG AACTTATCAG
ATGGATTCCA TCGCCAACCG TATGGAATAT CAGAAGGTAT TTAACTTCAG TCCGGAATAT
ATCAGCACCG GCAGTACGGT CGTAGGCTTC AACCTCGACG CCCTGCTCTC CATGCGGAAG
ATCAAAAGAA TGGAACGATT CAGAGATCAC CTGATAGAAC TGGAACAGGA AGATTACGTC
AATCACCGTT TCAATAAAGC CCTGGTAAAA AAACTGACCG GAATCAGCGA TTCCACCGCC
CTGGAAGCCT TTATGCAACG CTATCGCCCC AGCTACTACC AGATCCTTGA ATACGATACA
GAATACGATT ACTTCAGATA CATCAAAGAC CTCGCCCGCT ATTTCAGATA TGACTGGAAA
CGCGAGCATC CCGAAAGCAA ATAG
|
|---|
| Protein sequence | MSNSTLLLKT VLFFILVLAG GIATAQVRVY GTVYDRSGRF GMPYVSVMSS SGGGTVTDSL
GRYSLNMAPA DSLSFSYQGK ATMKIPVAEI PRNRPFDTKI HVDVTTLPTV IVEEKRRTYQ
MDSIANRMEY QKVFNFSPEY ISTGSTVVGF NLDALLSMRK IKRMERFRDH LIELEQEDYV
NHRFNKALVK KLTGISDSTA LEAFMQRYRP SYYQILEYDT EYDYFRYIKD LARYFRYDWK
REHPESK
|
|---|
| |