Gene Cpin_6184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6184 
Symbol 
ID8362366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7801132 
End bp7801884 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content48% 
IMG OID644968312 
Producthypothetical protein 
Protein accessionYP_003125791 
Protein GI256425138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0969772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA TGTTTCTTCC GCTGCTGCTC CTCCTGACTA TTTGTTTTGC AGCCTGTAAA 
AAGTCAGCCG AAGGTCCCGG TGAGACGCCA CAAACAGAGT ATGATAACGC CGCTAAAGTA
CGCGCTTACA TCCGCGATCT GGGATTCCCT GACAATGCGG TTGTCGAAAA TGCAAAAGAG
TTTATTGCCG AAGGAGATAT CGTCTTCCCT AAAGACATGG AGATACCTTC CGGTAAGCCT
AAAACTGAAC AGTATTATAC CGGTAGTCTG GTATCTGCGA CCAATGTGAC AAACATCCGT
CTGCGCATTG ATGCTTCCAT GACTTCCATG ACATCAGAGA TTAACTCTGC TATCAGCCAG
TGGAATGCTA TTTCGGGTTG TTCTATCAAC TGGACAGTGA CTACTGGTTC TTCCTATGAT
GTGATTATCA TTGACAGTAA TCTGGGCAGT GGCGTATGCG GTTCCGGTAC ATTCCCTTCC
GGTGGTCGTG CAGGTGGTAC GATCCGTATC AACAAAGCCT ATATTGCCGG TAACAGTTTT
GCACAGCGTG CACGTACCAT CTGTCATGAG ATGGGACATA ATGTGTCTTT CAGACATACG
AACTGGTCAG CAATCGGTGA ATCAAGTGCT ACTGCCGTTC CTGGTGTAGG TGGTACGGAT
GCGTCTTCAT TGATGAATGG CGGTCAGTGT GGCAGCGGTG CAACCGTATT GTCTACAAAA
GATATCCAGG CTGCACAGGT GCTGTACCCA TGA
 
Protein sequence
MKNMFLPLLL LLTICFAACK KSAEGPGETP QTEYDNAAKV RAYIRDLGFP DNAVVENAKE 
FIAEGDIVFP KDMEIPSGKP KTEQYYTGSL VSATNVTNIR LRIDASMTSM TSEINSAISQ
WNAISGCSIN WTVTTGSSYD VIIIDSNLGS GVCGSGTFPS GGRAGGTIRI NKAYIAGNSF
AQRARTICHE MGHNVSFRHT NWSAIGESSA TAVPGVGGTD ASSLMNGGQC GSGATVLSTK
DIQAAQVLYP