| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6173 |
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| Symbol | |
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| ID | 8362355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7791580 |
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| End bp | 7793424 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968303 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003125782 |
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| Protein GI | 256425129 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.873861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.124893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TAGTATCCTG TCTGCTGTCG TCTGTGTGTC TCGCTACGGC AGCAAATGCC
CAGCAGCAAC AGTGGCATCT GATCAAAGAC AGAATTGTAA CCCAATGGGC TGAGAAGGTA
GATCCTAAAG CACCTTTGCC CGAGTATCCA CGTCCGATGC TGGTTAGAAG TAATAACTGG
CAAAATCTCA ATGGTCTCTG GAGTTATGCA ATTACAGGTA AGTCTCAACC GCAACCATCT
ACTTATGATG GAAGCATCCT TGTTCCTTTT GCTGTGGAGT CAGCATTGTC AGGCGTAGGC
CGCAATGTTG GAAAAGACAG TTTGTTGTGG TATAAAACCA CTATCAGTAT TCCTGCTTCT
ATGAAGAACA AGGAAGTACT GCTGCATTTC GGTGCTGTGG ACTGGCAAAC AGAGGTTTTT
GTGAATGGCG CCAGCGTAGG TAAACACGAA GGTGGTTATG ATCCTTTCAG CTTTAACATT
ACTTCTTTCC TGAAGAAAGG TGGTAAACAG GAAGTGACAG TACGCGTGTG GGACCCGACA
GATGACGGTC CGCAGCCCGC GGGTAAACAG GTCGTAAAGC CAGAAGGTAT CTGGTATACA
CCTGTAACAG GTATCTGGCA AACGGTATGG CTGGAAGCGG TTCCGAAGAC ATACATCGCC
TCTACCAAAC AAACGCCTGA TGTGGATAAA CACACCCTTA CACTGTCTGC GGATGTACAG
AATGTGCAGG ATGGCGATAA GCTGAAAATT GAAGTGCTGG AAGGCGATAA GGTGATTGCC
CAGCAGGAGG CGGGTGCAAA AGATGCGGCG GTTATTACGA TGTCCAACGA GAAATTATGG
TCTCCTTCCA ATCCGTATCT GTACAACCTG AAAGTAACGC TGCTGCGCAA TAATAAACCA
GTAGATGAAA TCAAGAGCTA TTTCGCGATG CGTAAGATTT CCATGGCGAA AGATGCGAAA
GGCGTACAGC GTATGATGCT GAATAATGAG TTCTTGTTCC AGTATGGTCC ACTGGATCAG
GGCTGGTGGC CTGACGGTCT GTATACGCCG CCTACATATG AGGCAATGGT ATACGACATC
GATCAGCTGA AAAAAATGGG CTTTAATATG ATCCGAAAAC ACATTAAAGT GGAGCCGGCA
ACATATTATA CCTATTGCGA TAAAGCAGGT ATCCTGTTAT GGCAGGATAT GCCAAGCGGT
GACAGAGGTA ATGGATGGGA AAACCGTCCG GGTATCTATG ATCATCAGAC GGACAAAGAC
CGTAGCGCTG CATCAGAAGG CTATTACCGT AAAGAGTGGA ATGCCATCAT GGACGCTTTG
CACAACTATC CGAGTATCGT AGTATGGATT CCATTCAACG AAGCATGGGG TCAGTTCAAA
ACGGTTGAGA TCACAGAGTG GACTATGAAG AAAGATCCAT CCAGACTGGT GAACAGCGCG
AGTGGTGGTA ACTTCTACAT CACTGGTCAT ATCCTGGATC TGCATAATTA TCCGCATCCA
GCGATGCCAA GTCCGGAGCT GTTTGGCGAA AAACAGATCC TGGTATTGGG AGAGTTTGGC
GGATTAGGTT TACCGGTAGA AGGACATACC TGGCAGCAAA ACAAGAACTG GGGCTATCAG
TCATTCAAGA CCTCTGATGA TATGTTCAAA CGTTATAATG AATTTACGCA AAGGATCTCG
CAGCTGATCC CGTTAGGTTT ATCTGCGGCG GTATATACAC AGACAACCGA TGTGGAAGGT
GAGATCAATG GTTTTATGAC TTATGACCGT AAAGTGGATA AGTTCCCGGT GGATAAGATG
AAAGAAGCGA ATACGAAGTT GTATAATCCG GCACTGGCGA AATAA
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| Protein sequence | MKKLVSCLLS SVCLATAANA QQQQWHLIKD RIVTQWAEKV DPKAPLPEYP RPMLVRSNNW
QNLNGLWSYA ITGKSQPQPS TYDGSILVPF AVESALSGVG RNVGKDSLLW YKTTISIPAS
MKNKEVLLHF GAVDWQTEVF VNGASVGKHE GGYDPFSFNI TSFLKKGGKQ EVTVRVWDPT
DDGPQPAGKQ VVKPEGIWYT PVTGIWQTVW LEAVPKTYIA STKQTPDVDK HTLTLSADVQ
NVQDGDKLKI EVLEGDKVIA QQEAGAKDAA VITMSNEKLW SPSNPYLYNL KVTLLRNNKP
VDEIKSYFAM RKISMAKDAK GVQRMMLNNE FLFQYGPLDQ GWWPDGLYTP PTYEAMVYDI
DQLKKMGFNM IRKHIKVEPA TYYTYCDKAG ILLWQDMPSG DRGNGWENRP GIYDHQTDKD
RSAASEGYYR KEWNAIMDAL HNYPSIVVWI PFNEAWGQFK TVEITEWTMK KDPSRLVNSA
SGGNFYITGH ILDLHNYPHP AMPSPELFGE KQILVLGEFG GLGLPVEGHT WQQNKNWGYQ
SFKTSDDMFK RYNEFTQRIS QLIPLGLSAA VYTQTTDVEG EINGFMTYDR KVDKFPVDKM
KEANTKLYNP ALAK
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