| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6171 |
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| Symbol | |
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| ID | 8362353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7787822 |
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| End bp | 7790263 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968301 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003125780 |
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| Protein GI | 256425127 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0434587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0455178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT GTAAAATAGC ATTACTGGCA ATGGTACTCA TGAGTGTAAA AGGGATGTCC
CAGGCACGTC AGGAATACCT ATTGGAGAAG AACTGGAAGT TTGCCAAAGG CGAGCATCCG
CAGGCCTTAA ATGAGGCGTT TAATGATAAA AGCTGGGAGA CAGTCCGCAT ACCGCACGAT
TGGGCTATAA AAGGCCCGTT TGACGGCAAT AACGATTTAC AAAAAGTACA GATCGTACAG
AACGGTGAAC AGGAAGCAAC AATGAAGGCA GGCCGTACAG GTGGTCTGCC GTTCATTGGC
GCGGGCTGGT ACCGTTTGTC CTTCTCCGTC CCGGAATTCC GCGCAGGCAA AAAGGCGGTC
CTTCTTTTTG ACGGCGCCAT GAGCAACGCA GTAGTATATG TTAATGGTAA AAAAGTGGGT
AACTGGCCCT ATGGCTATAA CTCCTTCTCT TTTGACATTA CCTCCTTCCT GCATACAAAA
GCGCAGAACA CACTCGCCGT ACGGCTGGAA AACTTCGAAC AGGCTTCCCG CTGGTATCCC
GGCGCAGGAC TGTACCGCAA CGTACACCTG ATCGTCACCA ACGATACGCA CGTGCCTGTC
TGGGGTACTT ATCTCACCAC CCCGACAATC ACACAGGAAA ATGCAGCAGT ACAACTCCTG
ACCACCATCG ACAGAAGTAA TAAACAATCT ACACTCAGCG TAAAGACCCG TCTGCTCGAT
GCTGCCGGTA AAGTGGTAGC TACTGCCGTT ACGCCTTTAA AAGCAGACAG CAGCACCGTC
ACACAGCAAT TCTCCATAGC GCATCCCGTA CTATGGTCTC CGGAGACCCC CGTCATGTAC
AAAGCCGTCA CACAGGTATA TGAAGGAACA CAGCTAAAAG ACCAATATGA GACGCCCTTC
GGTATCCGTA CCATCGAATA CAAGGCCGGT AAAGGTTTCT TGCTGAATGG TCAGCCGAGA
AAGTTCAGGG GCGTTTGCAA TCACCATGAC CTCGGTCCGC TAGGCGCTGC TATCAACACC
GCCGCTTTAC GCAGACAGAT CCGCCTGCTC AAAGATATGG GCTGCGACGC GATCCGTACA
TCGCACAACA TGCCCGCACC AGAACTCGTA ACACTTTGTG ATGAAATGGG CATCATGCTG
ATGGTAGAGT CTTTTGACGA ATGGAAAGCA CCAAAAGTGA AGAATGGTTA CAGCTTTTAT
TTCGATGATT GGGTCGAAAA GGATTTACTG AATATGCTGC ATCACTACCG GAATAATCCT
TCCAATATCA TGTGGAGCAT CGGCAATGAA GTACCTGATC AAAGCTCCGC CAATGGGAAA
GACATCGCAC GCCGCCTGCA GGACATCTGT CACCGCGAAG ACCCTACCCG TCCGGTAACG
GCAGGTATGG ACCGTTTTGA CGATGCTATC AATAAAGGCT TCGCCGCTGT ACTCGATATA
CCGGGCTTTA ATTACAAACC TGCCCGTTAT CCGGAAGCCC ACAGTAAACT CCCACAGGGT
TTTCTCATGG GTTCAGAAAC GGCGTCTACC GTAAGTTCCA GGGGGATTTA TAAATTCCCG
GTGGGTTTCT ACAAAGGAAA AATGTACGAT GACAACCAAT GTTCATCCTA TGACTTCGAA
GTCTGCTCCT GGTCACAGGT GCCTGATGAC GAATTCGTAC AACAGGAAGA CCTCGGCTAC
ACCATGGGTG AATTCGTATG GACCGGTTTC GACTATCTCG GCGAACCTAC CCCCTATGAT
TCCAAATGGC CTTCGCACAG CTCCTATTTC GGCATCTTCG ACCTGGCAGG TATTCCAAAA
GACCGTTTCT ACCTGTATAG AAGTCACTGG AACAAACAAC AACCCACTTT ACACCTCCTG
CCTCACTGGA CATGGCCAGG CAGAGAAGGA CAGGTCACAC CTGTATTCTG CTATACCAGT
TATCCTTCAG CAGAACTCTT TGTCAATGGG AAAAGCATGG GAAAATTAAG CAAAGACACT
TCCACGCACC AAAGCCGCTA CCGCCTGATG TGGAATGACG TGGTCTATCA GCCAGGTACC
ATCCGTGTAG TGGCTTATGA TAATACCGGT AAAGCCGTTG CAGAAGACAG CGTATCGACA
GCCGGCACAC CACATCATAT CCAGCTGGAA GCGGACAATA ACGTGTTAAC CGCCGATGGG
AAAGACCTGT CTTATATTAC AGCTAGTGTA GTAGATGCAA AAGGGAATCT TTGTCCTGCC
GCCACAAACT TATTGCAGTT TGAAATAACA GGTGCAGGTA GCTTTAAAGC AGTTGCCAAT
GGCGATCCTA CCTGCCTGGA AGCCTTTCAT TTACCGCAGA TGAAAGCATT TAGTGGTAAA
CTCGTATTTA TTGTTCAATC GGGAGAAAAA ACAGGCGTTG TAAAAGCGCT TGTAAAATCA
GATGGCTTGC AATCTGCCAG TTGTACAATA CATGTTAAAT AA
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| Protein sequence | MNKCKIALLA MVLMSVKGMS QARQEYLLEK NWKFAKGEHP QALNEAFNDK SWETVRIPHD
WAIKGPFDGN NDLQKVQIVQ NGEQEATMKA GRTGGLPFIG AGWYRLSFSV PEFRAGKKAV
LLFDGAMSNA VVYVNGKKVG NWPYGYNSFS FDITSFLHTK AQNTLAVRLE NFEQASRWYP
GAGLYRNVHL IVTNDTHVPV WGTYLTTPTI TQENAAVQLL TTIDRSNKQS TLSVKTRLLD
AAGKVVATAV TPLKADSSTV TQQFSIAHPV LWSPETPVMY KAVTQVYEGT QLKDQYETPF
GIRTIEYKAG KGFLLNGQPR KFRGVCNHHD LGPLGAAINT AALRRQIRLL KDMGCDAIRT
SHNMPAPELV TLCDEMGIML MVESFDEWKA PKVKNGYSFY FDDWVEKDLL NMLHHYRNNP
SNIMWSIGNE VPDQSSANGK DIARRLQDIC HREDPTRPVT AGMDRFDDAI NKGFAAVLDI
PGFNYKPARY PEAHSKLPQG FLMGSETAST VSSRGIYKFP VGFYKGKMYD DNQCSSYDFE
VCSWSQVPDD EFVQQEDLGY TMGEFVWTGF DYLGEPTPYD SKWPSHSSYF GIFDLAGIPK
DRFYLYRSHW NKQQPTLHLL PHWTWPGREG QVTPVFCYTS YPSAELFVNG KSMGKLSKDT
STHQSRYRLM WNDVVYQPGT IRVVAYDNTG KAVAEDSVST AGTPHHIQLE ADNNVLTADG
KDLSYITASV VDAKGNLCPA ATNLLQFEIT GAGSFKAVAN GDPTCLEAFH LPQMKAFSGK
LVFIVQSGEK TGVVKALVKS DGLQSASCTI HVK
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