| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6169 |
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| Symbol | |
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| ID | 8362351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7783935 |
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| End bp | 7784963 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968299 |
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| Product | Arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_003125778 |
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| Protein GI | 256425125 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3867] Arabinogalactan endo-1,4-beta-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0209217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TGATAATAGC AACTAGCCTG CTCTTAGCGG CAGCAATGGG TTGCAAAAAA
TATGAAATGC CGGGCAATAC GCCAGCTACC AATCCTATCC TGGAGAAAAT GGTACGCGGC
GCAGACGTTA GCTGGCTTAC AGAAATGGAA GCCGCAGGTA TGAAATTTTA CGATACTACC
GGCAAACAAA CCGACGGCAT GCAGTTGATG AAAAACGTCA ACATGAACGC TATCCGTCTG
CGCATATGGG TCAATCCTTC CGGTGGGTAC AATAACCTCG CTGATGTATT AGCCAAAGCA
GCACGCGCAC ATGCACTCGG TATGCAATTA CTGATAGATT TCCACTACAG CGATTCATGG
GCGGATCCCG GGCAACAAAC CACTCCTGCG GCCTGGAGCA ACCAGGATAT CACAGCACTG
CAAACATCCG TCTATAACCA TACACATGAA GTACTGACCG CCCTGAAAGC AAAAGGTATC
ATCCCTGTAT GGGTGCAGGT CGGCAACGAA ACCAACAATG GTATGTTATG GCCTCTAGGC
AAGGCATCCG AACACATGGA TAACTTTGCC CTGCTGATCA ACGCCGGTTA TAAAGCCGTA
AAGGAAATCG ACAGCCATAT CAAAGTCATT GTTCATCTTT CAAACGGATA TGACAACGGA
CTCTATAAAT GGATGTTCGA CGGCCTCACA GCCAATAAAG CCAACTTCGA CATTATTGGT
ATGTCTCTTT ACCCTGCTAC GGTAGAATGG CAGACGCCTA ATCAGCAATG CGAAGCCAAC
ATGCGCGATA TGGTATCCCG TTACAACAAA GAGATCATGC TCTGCGAAAT AGGGATGCCC
GCCACATCAC CGGTTGCCAC CAATTACTTT ATCCGTGACC TTTACACAAG AATCCATAAC
TTACCGGATG GCAAAGGCCT CGGACTCTTC TATTGGGAAC CACAGGCATA TAACAGATGG
CAGAACTACC TGCTCGGCGC ATTTGACAAT ACCGGCAAGC CTACATTCGC GATAGACGCC
TTCAGATAA
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| Protein sequence | MKKLIIATSL LLAAAMGCKK YEMPGNTPAT NPILEKMVRG ADVSWLTEME AAGMKFYDTT
GKQTDGMQLM KNVNMNAIRL RIWVNPSGGY NNLADVLAKA ARAHALGMQL LIDFHYSDSW
ADPGQQTTPA AWSNQDITAL QTSVYNHTHE VLTALKAKGI IPVWVQVGNE TNNGMLWPLG
KASEHMDNFA LLINAGYKAV KEIDSHIKVI VHLSNGYDNG LYKWMFDGLT ANKANFDIIG
MSLYPATVEW QTPNQQCEAN MRDMVSRYNK EIMLCEIGMP ATSPVATNYF IRDLYTRIHN
LPDGKGLGLF YWEPQAYNRW QNYLLGAFDN TGKPTFAIDA FR
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