| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6157 |
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| Symbol | |
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| ID | 8362339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7766203 |
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| End bp | 7766769 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968287 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003125766 |
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| Protein GI | 256425113 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.200683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTCCTC CATTAGATAA TGAAATTTTT TTATTCAGGC AGATTGGGGA AGGAAATGAG
ATTGCATTCC GTAAGGTTTA TTACCACTAT TACAGGCAAT TATATGGTTT CGTGCTCAAG
GCTGTAAAGT CCGACCCTGT CACAGAAGAA ATTGTGCAGG AGACGTTTGC CCGTTTGTGG
GAAAACCGCG CTGCTCTTGG AGAAAAAGGA TATTCTGCCC CCTGGCTCTT TCGTGTTGCT
GCCAACCTCT CCTTTGATTA TATGAGGAAA GCCGCTCATG AAGCAAAATA TTTTAATCTG
TTGTCAGCCT CTCCCGGTGA ACCTTCTGCC AATAATGTAG CCGACTATAT AGAGGGCGTA
CAAAGCAACC ATCTTTTACA CGAGGCCATC GACAGTTTAC CTCCCCAGCG CCGCACCATT
TTCCGGTTAT CAAGATTAAA AGGGCTCAGT CACCAGGAAA TTTCCCAGCA CCTCAATATT
TCTGAAAATA CCGTTAAAAA CCAGCTGGTG ACCGCTTTAA AGGCTGTTCG CCAGTTCATG
AACGATGCTA CCCGCCTCTT TTTTTAA
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| Protein sequence | MVPPLDNEIF LFRQIGEGNE IAFRKVYYHY YRQLYGFVLK AVKSDPVTEE IVQETFARLW
ENRAALGEKG YSAPWLFRVA ANLSFDYMRK AAHEAKYFNL LSASPGEPSA NNVADYIEGV
QSNHLLHEAI DSLPPQRRTI FRLSRLKGLS HQEISQHLNI SENTVKNQLV TALKAVRQFM
NDATRLFF
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