| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6154 |
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| Symbol | |
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| ID | 8362336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7759625 |
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| End bp | 7761055 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644968284 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003125763 |
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| Protein GI | 256425110 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.496977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAG GTATTTATCA CTTCGCATAT ATTCTCGTTA TTGCCATTCT TACATCGTGC
AATAAATATC TTGACATCGT TCCGAAGGGA CAACTGGTAG TGGAAACTAC GCAGGACTTT
TATAATATGG TAAGCCTCCC CAACAGAGGA TATCCGATTA ATAACTTCCA GTACCTGGTA
GACGATCAGT GGATGAAAGA GTCCAATGTG ATCGGTATCA TCAAAAACAT GGATATTATT
AACTTCACTG CTGATACTAC TGAAAATCGC GTCAACAGGC TGAGCGCTTC CTCCCTGTAT
AATCAGGCAT ATAAGTACAT TAACAGATGG AATATGATCA TTACGCTTGT TGATGGCAGC
GAGGGAGATG AAAATCTCAA GAAGCTGGCA AAGGCCGAAG CGAGAGTTCA GCGTGCATTT
GATCATTTTG TTGTCCTGAA TACATTTGGC CGTCCATATG TGCCGGAAAC GGCAGCCAAT
GACGGCGGTA TCTGCATCAT GGATAAGTAT GATCTGGAAG CGAAACCATC GAAATCATCA
GTAGCGGAAG TGTATGCTTT CATAGAAAAA GATCTTGACG AATCTATTCC ATATCTGCAG
GTAACGCCTG TGGATGTATA CCATCCATCT CTCGCATTTG CATGGGCGCT GAAAGCGAAG
GTACATCTCT TCAAAAGAGA ATGGGATAAA TGTATCGCTG CGGCGCAGCA GTCATTGTCG
TACAATAACA AGCTGCTTGA CCTTGTAGCA TTGAAAGCAG CAGGCGGCCC CACCTTGAAT
CCAATCGCAG CCGGCAATAA TCCGGAAGTA CTTAGTTATA CATACATGAC GGGTCGTAAT
GAGTTAAACT TAGGATACAC ATTTATTATT AGTCCTGAGT TAAGAGCACT GTTCGGTCCT
ACTGACACGA GGTTTACTAT GTTCTTTAAC ACCACCAACC GTACATACCT GGATATTGGC
TCAAATACTG CTTACTGGCA GGTGAAATTT ACAGACTTCT TTACAGTGAC TGTGGGTATG
AAAACGCCGG AAGTGCTGTT AATGCTGGCT GAATGTTATG CCCGTAAAGG AAGTCTTACC
GAAGCGATGA CACTGATTAA TGACCTGCGT GCCAAACGTA TCACCGATGC ACAGGAAGCT
CACCTGGAAA CGCCAGCTAC TGTAAAGGAA ACGATGGATA TCCTCATCAG CGAAAGAAGG
AAAGAACTCC TGTTCGGCTT TCATCGCTTC TGGGACCTGC GCAGACTGAA TCTCGAACCG
GAATATGCAA AAACGGTAGT GCATAAATTC CCGCTGGTCA ATACGACTGT GCCACAGGTA
GAATATAAAC TGCCCCCTAA TTCATATATG TACATCATTC CGTTTGCACA GGATGTATTG
AAGCAGAATC CTAAACTAAC TCTTAATACA AATGAAAAGC TTCCCTGGTA A
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| Protein sequence | MKSGIYHFAY ILVIAILTSC NKYLDIVPKG QLVVETTQDF YNMVSLPNRG YPINNFQYLV
DDQWMKESNV IGIIKNMDII NFTADTTENR VNRLSASSLY NQAYKYINRW NMIITLVDGS
EGDENLKKLA KAEARVQRAF DHFVVLNTFG RPYVPETAAN DGGICIMDKY DLEAKPSKSS
VAEVYAFIEK DLDESIPYLQ VTPVDVYHPS LAFAWALKAK VHLFKREWDK CIAAAQQSLS
YNNKLLDLVA LKAAGGPTLN PIAAGNNPEV LSYTYMTGRN ELNLGYTFII SPELRALFGP
TDTRFTMFFN TTNRTYLDIG SNTAYWQVKF TDFFTVTVGM KTPEVLLMLA ECYARKGSLT
EAMTLINDLR AKRITDAQEA HLETPATVKE TMDILISERR KELLFGFHRF WDLRRLNLEP
EYAKTVVHKF PLVNTTVPQV EYKLPPNSYM YIIPFAQDVL KQNPKLTLNT NEKLPW
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