| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6150 |
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| Symbol | |
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| ID | 8362332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7754523 |
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| End bp | 7755095 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968280 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003125759 |
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| Protein GI | 256425106 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.968895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTCAGGTG AACAATTATT ATGGGATGCG GTCAGAAATA GTGATGTAAA AGGCCTGGAA
GCATTATATA AAAAGTATAA TGAAGCTTTA TACAGCTATG GTAAGAAATT TACCGGGGAT
ACCCACCTGG TAGAAGATGC CGTACAGGAA ACATTCATCT CCATCTGGAA ATACCGGGAA
CGTCTCTCCG TGACTTCCAT GTTCAATCTC TATATCTTCA AATCTTTCCG TAACCACCTG
TTCCGTCTTA TCAAAGAACA ACAAAATACC TCCTACCAGG AAGATGACCT GTCCTTCTCG
TTTGAACTGG GTTTTGATGC CCGTTTTATT GAAGGAGAGG AGGCCGCTAT ACTATCTGCC
CAGATCCGCC AGGCGCTTTC CAAACTGACC AGCCGGCAAA GAGAGATTAT CTGGTTCCGC
TTCTTTGAAG GCCGTTCTTT CGAAGAGATC GCAGAGATTA TGGACATGCA GGTCAGGGCC
ACCTATAAGC TCTCTGCCCG TGCCCTGGCT TCCCTGAAAG AAATTATGGA AGGACCAGCC
CTCTTATTGT TGCTTTCCTT ATTAAGGAAT TGA
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| Protein sequence | MSGEQLLWDA VRNSDVKGLE ALYKKYNEAL YSYGKKFTGD THLVEDAVQE TFISIWKYRE
RLSVTSMFNL YIFKSFRNHL FRLIKEQQNT SYQEDDLSFS FELGFDARFI EGEEAAILSA
QIRQALSKLT SRQREIIWFR FFEGRSFEEI AEIMDMQVRA TYKLSARALA SLKEIMEGPA
LLLLLSLLRN
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