Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6107 |
Symbol | |
ID | 8362289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7707951 |
End bp | 7708601 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968238 |
Product | NmrA family protein |
Protein accession | YP_003125717 |
Protein GI | 256425064 |
COG category | [R] General function prediction only |
COG ID | [COG2910] Putative NADH-flavin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA TCATATTAAT CGGAGCCAGT GGATTTGTAG GCTCAGCTAT ATTGAACGAG GCCCTCTCAA GAGGCCATCA GGTGAAAGCA GTTGTGCGTC ACCCCGAAAA AGTAACAGTG AAGCATGATA AACTGGAGGT AGTAGCCGCT GATGTACAGG ATGCTGCCGC ACTGACTGAT ATTATCAAAG GTGCAGATGC AGTGATCAGC TCTTATAATC CGGGCTGGAC AAATCCTGAT ATTTACAACG ATACTTTGAA TGGTTACAAA TCCATCATCG GAGCCGTAAA GAATGCTGGT GTACAGCGTC TGCTGGTAGT AGGCGGCGCA GGTTCCCTCT TCGTGAAACC GGGTGTAACC GTTATGGATA CAGGCGTATT GCCGGAAGCA ATCATGCCTG GTGTAAAAGG TCTTGCGGAA GTGTATCACA ACCAGTTAAA ATCAGAAACT TCCCTGGATT GGGCGTTCTT CTCTCCGGCA GGTAATATCG CTCCTGGTCA GCGTACCGCT AATTACAGAT TAGGCAAAGA TGATCTGATC GTAGATGCAA AAGGAGAAAG TAATATTTCA GTGGAGGATT ATGCAGTAGC TATGATCAAT GAACTGGAAA CACCAGCACA TCATAAGACC CGTTTTACCA TCGGATACTA G
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Protein sequence | MANIILIGAS GFVGSAILNE ALSRGHQVKA VVRHPEKVTV KHDKLEVVAA DVQDAAALTD IIKGADAVIS SYNPGWTNPD IYNDTLNGYK SIIGAVKNAG VQRLLVVGGA GSLFVKPGVT VMDTGVLPEA IMPGVKGLAE VYHNQLKSET SLDWAFFSPA GNIAPGQRTA NYRLGKDDLI VDAKGESNIS VEDYAVAMIN ELETPAHHKT RFTIGY
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