Gene Cpin_6107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6107 
Symbol 
ID8362289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7707951 
End bp7708601 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content46% 
IMG OID644968238 
ProductNmrA family protein 
Protein accessionYP_003125717 
Protein GI256425064 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATA TCATATTAAT CGGAGCCAGT GGATTTGTAG GCTCAGCTAT ATTGAACGAG 
GCCCTCTCAA GAGGCCATCA GGTGAAAGCA GTTGTGCGTC ACCCCGAAAA AGTAACAGTG
AAGCATGATA AACTGGAGGT AGTAGCCGCT GATGTACAGG ATGCTGCCGC ACTGACTGAT
ATTATCAAAG GTGCAGATGC AGTGATCAGC TCTTATAATC CGGGCTGGAC AAATCCTGAT
ATTTACAACG ATACTTTGAA TGGTTACAAA TCCATCATCG GAGCCGTAAA GAATGCTGGT
GTACAGCGTC TGCTGGTAGT AGGCGGCGCA GGTTCCCTCT TCGTGAAACC GGGTGTAACC
GTTATGGATA CAGGCGTATT GCCGGAAGCA ATCATGCCTG GTGTAAAAGG TCTTGCGGAA
GTGTATCACA ACCAGTTAAA ATCAGAAACT TCCCTGGATT GGGCGTTCTT CTCTCCGGCA
GGTAATATCG CTCCTGGTCA GCGTACCGCT AATTACAGAT TAGGCAAAGA TGATCTGATC
GTAGATGCAA AAGGAGAAAG TAATATTTCA GTGGAGGATT ATGCAGTAGC TATGATCAAT
GAACTGGAAA CACCAGCACA TCATAAGACC CGTTTTACCA TCGGATACTA G
 
Protein sequence
MANIILIGAS GFVGSAILNE ALSRGHQVKA VVRHPEKVTV KHDKLEVVAA DVQDAAALTD 
IIKGADAVIS SYNPGWTNPD IYNDTLNGYK SIIGAVKNAG VQRLLVVGGA GSLFVKPGVT
VMDTGVLPEA IMPGVKGLAE VYHNQLKSET SLDWAFFSPA GNIAPGQRTA NYRLGKDDLI
VDAKGESNIS VEDYAVAMIN ELETPAHHKT RFTIGY