Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6088 |
Symbol | |
ID | 8362270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7688754 |
End bp | 7690361 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644968219 |
Product | hypothetical protein |
Protein accession | YP_003125698 |
Protein GI | 256425045 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCT TCAGTGTACT ATTCAACATA CTGAAAACCA TCTCCGTATC TTTATTGATC ATGCTACCAT TTACAGCGGG GTCACAATCG ATGCCGATTT ATTTGCAGAA TCCATCATTC GAAGGACAAC CTACAATGAA TGGTATACCA GCACCCTGGT ACCAACGTTC TGTAAATCTG ATAGCATACA CACTACCGCT TGGATCGAAC AATGAGATAC CCCCTTCAGA TGGTAAGACA TATGCCGCTT TGCTCGCAGC ATCAGAGAAT AATACATCTG CCGGTCATGC TGTATGGACT TCTATCGGAC AACAATTATC ACATCCCATC GAAGCAGGTA AAGCCTATCT CATATCTTTT GATATGGCCT TGATGCCCGA AGATGATAAG AGTGATCAGA CAGCTGCTAC CTCTACTGCT TTAGCAATAC TGGGCTCCAG TTCTGAACAG GATATAGGAG AACGCATCTG GTACTCAGGT ATTTACTACG ACAGAAAATG GGGAAGAATC ACAGCTGTAC TGAAACCGAA AAAGACATAC GCACATCTTC GCTTTGAACC TTACGTAACT GACTATGACG ACACTTGTTA TGTCGTCACA TTCCTCGACA ATATCTCCAT GATCGAAGAA ACACTCAACT TCGATACCTA TGCAGAGAAT ACCTGTTATG GACACAGTCA GGGGAAGGTA TCAGTACAGA TGCATACCAT GGATAAAGAC AATTACGTAT TTCGCTGGAT GCCCGGAGGT TATACAACAC CGGAAGTCTC TCAGCTACCG GCAGGCAAAT ACACGGTGAC CGTCACCAAT ACCACGAAAG GTAATTCCAG GTCGGAAACC GTAGAGGTCA AACAATGGGA TATCAACATC AATCCCATCG TAACACCTAT CAGTTGTAAC GGAGAATCGG ATGCCGCTAT CAATGCAAAT GCAAGTGGTA GTAAAGCGCC TTATAAATAT GCCCTGGTCA ACCAGTTTCC TGAACAGGAT TCCCCTGTAT TCAGTAACCT GCGCGCCAAT TATTATACAC TGCAGGTAAC CGATAGTATG GGTTGTAATA AGATGCAGAG CATCAACATC CCTAACCCTC TGGTACTCCA GGTAAAAGAC GCCAGTACGA AGTCGCTTTC CTGCAGCAGC GTAAGAGACG GTCAGATCAT TATCACCATG AGCGGTGGTA CTACGCCTTA TCATTACAGC ATATCTGATA CAGCTACGCA ACTGGAAAAC CGCTTCCGTC GACTGGACGC TGGTAGTTAT CATTACAAAG TTGCCGATGA CCATAATTGT ACTGTTGAAG GCAATATTAC AGTAGAAAGA GGGATGAATG ATTGTGCAGT GTATATGCCT TCCGCATTCA GTCCGAATGG CGATGGTAAA AACGATCTGT TCAAAGCACG TGTACAGGAC GACGTCACCG ACTTCCGCCT GAGCATCTTC GGCAGATGGG GACAACTCGT ATACGAGAGC AGTGATCCGG AAGCCGGGTG GAATGGTAAA ATGCGCGGCG CTGATCTGCC ATCAGGCACC TATATCTGGA GTGTGATCTA CACAGATAGT AAGAAGCAAC CCATGAAACA ACAAGGTACC GTAACCATGT TTAAATAA
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Protein sequence | MKTFSVLFNI LKTISVSLLI MLPFTAGSQS MPIYLQNPSF EGQPTMNGIP APWYQRSVNL IAYTLPLGSN NEIPPSDGKT YAALLAASEN NTSAGHAVWT SIGQQLSHPI EAGKAYLISF DMALMPEDDK SDQTAATSTA LAILGSSSEQ DIGERIWYSG IYYDRKWGRI TAVLKPKKTY AHLRFEPYVT DYDDTCYVVT FLDNISMIEE TLNFDTYAEN TCYGHSQGKV SVQMHTMDKD NYVFRWMPGG YTTPEVSQLP AGKYTVTVTN TTKGNSRSET VEVKQWDINI NPIVTPISCN GESDAAINAN ASGSKAPYKY ALVNQFPEQD SPVFSNLRAN YYTLQVTDSM GCNKMQSINI PNPLVLQVKD ASTKSLSCSS VRDGQIIITM SGGTTPYHYS ISDTATQLEN RFRRLDAGSY HYKVADDHNC TVEGNITVER GMNDCAVYMP SAFSPNGDGK NDLFKARVQD DVTDFRLSIF GRWGQLVYES SDPEAGWNGK MRGADLPSGT YIWSVIYTDS KKQPMKQQGT VTMFK
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