| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6086 |
|---|
| Symbol | |
|---|
| ID | 8362268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7686680 |
|---|
| End bp | 7687462 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644968217 |
|---|
| Product | Peptidoglycan-binding domain 1 protein |
|---|
| Protein accession | YP_003125696 |
|---|
| Protein GI | 256425043 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCAC TCAAACTTAT CAGAATCAAT AGTACAGGTC CACTGGTAGA AAGCTGGCAG
TTTTTTCTCA TCGGACAACA TCTTTACTTC GGCGAAGCCG ATGGTGTTTT TTCCCGTGAA
GTACAGCAGG CGACCATCAC CTTTCAGCAA AAGCACAACC TCCAGCCCGA TGGCGTAGTA
GGCAACAAAA CATACGGCGT TGCGATGCAG CTGGGCTTCG ATGGCATCCT GGACGAAAGG
GACGATAAAT CAGGTCCTGA TTTCCCCAAA TCGCCATCTT TCAAACCATT GGTTTCAAAT
GATGAAAGAG CCGCTGTATT CGGTCGCTTT TCTTTTGTAT CAGATCCGGT ACCCGGCAAC
CCCGAAAACA TCCGTATCAC TGACAACTGG GCCACTGAAA ATATCAAGAT GGTATCTATC
CCCCAGCTGA TCAACATCAA AGGATCAGAC AGGGTACAGT TTCACCGGAA GGCAGAAGGA
CAGCTGATCA GCCTCTGGCA GGACTGGGAA GATGCCGGCT TATTACCGCT GGTATTAACC
TGGGCGGGAT CATTTGTACC AAGATTCATC AGAGGTAGCA GAAAAACACT CAGTAACCAC
TCATTCGGTT CAGCTTTCGA TATCAATGTG GCCTGGAACC CGCTGGGCGC CGTACCTGCA
CTCGTCGGAC AAAAAGGATC TGTCCGCGAA CTCGTACAGA TCGCCAACAA GAATGGTTTC
TACTGGGGCG GACATTTCAC CCGTAAAGAC GGTATGCACT TCGAAGTGGC ACAGATAAAG
TAA
|
|---|
| Protein sequence | MEALKLIRIN STGPLVESWQ FFLIGQHLYF GEADGVFSRE VQQATITFQQ KHNLQPDGVV
GNKTYGVAMQ LGFDGILDER DDKSGPDFPK SPSFKPLVSN DERAAVFGRF SFVSDPVPGN
PENIRITDNW ATENIKMVSI PQLINIKGSD RVQFHRKAEG QLISLWQDWE DAGLLPLVLT
WAGSFVPRFI RGSRKTLSNH SFGSAFDINV AWNPLGAVPA LVGQKGSVRE LVQIANKNGF
YWGGHFTRKD GMHFEVAQIK
|
|---|
| |