Gene Cpin_6085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6085 
Symbol 
ID8362267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7685099 
End bp7686448 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content50% 
IMG OID644968216 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_003125695 
Protein GI256425042 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTT ATGCTGTACG TTCGTGGTGC ATTTTCCTCT TTATTTCCCT CATTGTTGCT 
GCATGTAACA AAGAAGAACA GGCACCTTCC CCTGAAAACA CGATTGCTGT CGCCGACCAG
TCGGCAAGAA CACCCGCTGG TGCCTCCATT CCCGTTTCCT GGTATCAGCT GGAATTTAAA
CTTATTAAGG AGACTCCTGG TTTCACACCT CCAGTTGCTG CGAGAGCACT GGCTTATACC
GGTATTGCCC TGCATGAAGC CGTTGTATGG AGTGATCGCA ATGGTCATTC GCTCAGCGGA
CAACTCAACG GTTTGTACAA CATACCCCGC CCTGAAAGAG GGAAGCGATA CAATTGGGAA
ATAGCAGCCA ACAGCGCCAT GGCTGACATT ATTACCCGTT TGTACCCTAA CGTAAATGCT
GCCAATGCGG CTATTATCAA AGCGCAGGAT AGCCTGAACC TGGTGAACCT CTCCGGAGGG
TGTGACCAGG ATGAAGTTAA CCGTTCGGTG AACTTTGGTA AACAGATCTC TGCGGCCATC
TACGCATGGT CAGCCACTGA CGGTGGTAAA GACGGTTACC TGAATGGGTT CCCGACTGAT
TATATACCTC CTGTCGGACC GGCATTCTGG GTGCCTACAC CGCCTGCTTT TCAGCGTGCA
TTGTTGCCTT ACTGGGGTAA TAACCGGCTG CTGGTTAAAC CCCGTTATCC TGAAACAGCG
CCTGTTCAGC ATCCGGTGTT TTCTACAGAT ACCGCATCTG CTTTCTACAA GGCGGCTTAC
TATGTGTATA ACAAAGTGAA TACACTGACG CCTGAAGAAA ATACCACTGC ACTTTACTGG
GCAGACGGTG GTGGTACCTT TACACCTCCG GGACATTTAC TAGCCATTAC TGCGCAATTG
GTGACAGACG AAGGACTGAA CCTCACCCAA AGCGCTACAC TCTTCGCACA GGCGGGTATC
AGCGTAAACG ATGCAGGTAT CGTTTGCTGG AAATACAAGT ACAAATACAA CCTGCTGCGT
CCTGTTACTT ACATCCAGCG TCATATCAAT GCCGGCTGGG GTTCATTGAT CGCGACACCA
CCATTCCCTT CCTATACTTC CGGCCATGCT TCCTTTACAG GTGCAGCCGG TACAGTACTG
GCAGAATATT TCGGTAACGC GTATACATTC ACTGACAACC AGAAAGTAGC GGAAGGATTT
GCACCGCGTT CTTTTGGTAA TTTCCAGCAG ATGATCGATG AAGCTTCCAT ATCGAGAATC
TATGGCGGGA TACATTACCA GTTTGACAGC GAAGTAGGTG CGCAGACCGG AAGAGAGGTG
GGATTGAGGG TGTTGTCGTT GAGATACTGA
 
Protein sequence
MTIYAVRSWC IFLFISLIVA ACNKEEQAPS PENTIAVADQ SARTPAGASI PVSWYQLEFK 
LIKETPGFTP PVAARALAYT GIALHEAVVW SDRNGHSLSG QLNGLYNIPR PERGKRYNWE
IAANSAMADI ITRLYPNVNA ANAAIIKAQD SLNLVNLSGG CDQDEVNRSV NFGKQISAAI
YAWSATDGGK DGYLNGFPTD YIPPVGPAFW VPTPPAFQRA LLPYWGNNRL LVKPRYPETA
PVQHPVFSTD TASAFYKAAY YVYNKVNTLT PEENTTALYW ADGGGTFTPP GHLLAITAQL
VTDEGLNLTQ SATLFAQAGI SVNDAGIVCW KYKYKYNLLR PVTYIQRHIN AGWGSLIATP
PFPSYTSGHA SFTGAAGTVL AEYFGNAYTF TDNQKVAEGF APRSFGNFQQ MIDEASISRI
YGGIHYQFDS EVGAQTGREV GLRVLSLRY