| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6081 |
|---|
| Symbol | |
|---|
| ID | 8362263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7678196 |
|---|
| End bp | 7679314 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644968212 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003125691 |
|---|
| Protein GI | 256425038 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.497307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA CAAGAAGACA CTTTTTGCAC AAAATTACTG CTTCCGCTAT TGCATTGACC
GTTATACCCC GCCTGGGAAT GGCAGGCATA CCAGATCTGA CAGAAAAGCC ATATGACGGC
CCTGTATTGC GGGTGGCTAT TATGGGACTG GGTGGTTATG GCACCCGTGT GGCAGAGGCC
ATGCAATCCT GTAAAAAGGC TAAACTGGTA GGTGTTATCA GTGGAACGCC TTCCAAGATC
AAAACCTGGC AGGAGAAGTA TGGTATCCCT GAGAAGAACT GTTATAACTA CGAGAACTTC
GACAAGATCA AGGATAATCC GGATATCGAT GCGGTGTATG TGATCACACC CAATGCGCTG
CACCACGACC AGGTGATCAG GGTGGCGAAT GCGGGCAAAC ATGCGATCTG TGAAAAGCCA
ATGGCCCTGA ACGCCAAAGA AGGGCAGGAA ATGGTGGATG CCTGTAAGAA GAATAATGTG
AAATTGCTGG TAGGGTATCG TATGCACTTT GAACCGCATA CACTGGAAGT GATCCGGATG
CGGAAAGCAG GGGAGTTCGG GAAGATACTC TTCTTTCAGG GATTGTGTGG TTTCAAGTCG
GGTGATCCTA ATCAGTGGCG TCTGAACAAA AAATTAGCAG GTGGTGGTTC GATGATGGAT
ATTGGTATCT ATGCGTTGAA TGGAGCCCGT TATATGATTG GAGAGGAACC GGTGTGGGTG
ACGGCACAGG AGACGAAAAC CGATCCGCAG AAATTCAAAG AGGGAGTGGA CGAAACCATT
CAGTTCCAGC TGGGTTTTCC CAGTGGGGCA GTGGCGTCCT GTTTGTCCAC CTACAGTATG
AACAACCTGG ACAGGTTCTT CCTGAACGGA GATAAGGGGT TTGCGGAAAT GCTGCCTTCT
ACGGGGTATG GTCCTATTAA AGGGCGTACG CATAAAGGGG AGCTGGATCA ACCTGTGGTC
GTGCATCAGA CAGTGCAGAT GGAAGAGATG TCGGATATTA TTCTGCATGG TAAGCAGCCG
GTAGTGGATG TGAGCGGGGA GGAAGGGGTG CGTGATCTGA AGATCATAGA TGCGATCTAT
CTGGCGGTGA AAACCGGAAA GAAAGTAGAC CTGAAATAG
|
|---|
| Protein sequence | MKNTRRHFLH KITASAIALT VIPRLGMAGI PDLTEKPYDG PVLRVAIMGL GGYGTRVAEA
MQSCKKAKLV GVISGTPSKI KTWQEKYGIP EKNCYNYENF DKIKDNPDID AVYVITPNAL
HHDQVIRVAN AGKHAICEKP MALNAKEGQE MVDACKKNNV KLLVGYRMHF EPHTLEVIRM
RKAGEFGKIL FFQGLCGFKS GDPNQWRLNK KLAGGGSMMD IGIYALNGAR YMIGEEPVWV
TAQETKTDPQ KFKEGVDETI QFQLGFPSGA VASCLSTYSM NNLDRFFLNG DKGFAEMLPS
TGYGPIKGRT HKGELDQPVV VHQTVQMEEM SDIILHGKQP VVDVSGEEGV RDLKIIDAIY
LAVKTGKKVD LK
|
|---|
| |