| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6071 |
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| Symbol | |
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| ID | 8362253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7670145 |
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| End bp | 7671992 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968205 |
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| Product | ABC transporter related |
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| Protein accession | YP_003125684 |
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| Protein GI | 256425031 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.461067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACAG TCAGAACCTA TATTCCATTT TTTCTGTTGT TCATTCCGTT GACAGCTGGT
GCATTTGCCA ATGCATATTT CCAGTCATTT ATCATGGAAA TATTTATCTG GTCACTATTC
GCGATGTCAT TCAACATCAT TTATGGCTAT ACAGGGCTGT TGAGTTTTGG CGTCTCTCTT
TTTTTTGGCG CAGGCTGTTA CGGCTTTGCC CTATCGCTGA TACACTGGCA ACTTTCAATC
CCGGGCGCCC TCCTTTTTGC TATTGCACTG ACAACCGCTT TGGCCACCCT GACAGGTTTG
CTCGTCCTTA AAATCAGAAG TCACTATTTT GTAATCGTAT CAGTATTGCT TACATTGATA
CCGTTCTACC TCGCCAATCA TTTCCCACAG ATTACAGGAG GAGACGATGG CATTTCAGTT
CAGTTATCAG ATAAGCTTAT TCCTGGTACA GGTCTGTCCC CCTATAACCC CAGGCATATG
TATTGGACGG TTTGTTCACT TGCCATCCTC GTCCTTTTCC TTTGTTACAG ATTTCTGAAA
TCTCCGGTCG GCCTTATCTT AAAAGGTCTG CGCGAGAACG AAGTACGTGC ACAGTTTTTA
GGCTACAATA CACATAGGTA CCAGTTCCTG GCGTATATCG TCAGTGCTGT TCTTGCCGGC
ATTGCCGGCA GCTTATATGT GCTCGCATTC AAGTATACCA GCAGCATCTT CTTTCTCTGG
AGTTTATCCG GGGAGGCTAT CATCTGGACA ATATCCGGTG GAAGAGGTAC TTTCCTCGGA
CCTTTTATCG GCACTGCCGG ATTCCTTTTA TTTAAAGACG AATTGAGCAG CCGGGTTGAA
TATTATCCGC TGATAGTAGG CATCTGCCTG ATCCTCCTGA TCAGGTACCG AAAGAATGGT
CTCATGGGCA TGATCCCCCT ACCCCCCGGA TGGATAAACA ATTACGCCGG AAAAAGACAG
CTGACACAGC CAGCCACCAC CGCCCCTCCA TCACCATCCA ATAATACAGG ATTGCATTTT
ATTCTTTCCA CAGATGACCT GGGCATTTCC TTCGATGGCA TGAAAGCCGT TAAAGGAGTA
ACACTGGAAC TCTCCTGCCG TGAAATAAAA ATAAAAACAA ATACACCCTC CGGTACGGAA
TGGTTTCTTA AAGAGAACAA TAATGAACAT TTCCCCTGCC TGACGATGAT AGGATTAAAC
GGCGCCGGCA AAACAACCTT ATTCAATATC CTGAGTGGTG TGTATACCAA GGCGCATGGC
CAGATGAAAT TGCTGAACGA AGAGCTGTTT GTCAAAGAAA AAGGCTATTC AAAAATCAAA
TACAGTCAAC ACGAGATCGT TGAAAAAGGA CTGACAAGAA CCTTTCAGCA GGTACAACTA
TTCCCCGAAC TGACAGTACT TGAAAATTTT CAGATTGCCG CGCAGGCAAA GATCAATAAA
TGGGATTATA GCACTGACAG AGAACAGGCA GCACAGCGTC TTACAATCGT CGAAGAAATC
ATTTCACTGG TCAATCTGAC GGAAGAAAAA TACACAGCAG CACAACATCT TTCCTACGGC
AGACAAAAAA TGCTCGACAT AGGACTCTCT ATTGCATCTG GCGGTCAGAT ATTATTACTG
GACGAACCAA CGGCAGGTGT AAGCCCACAT GAAATAGTAC TCATAACGAA TCTCCTGTTA
AGATTGTCAT CAACACATAC GCTCATTTTG ATAGAGCACG ACCTGGAGGT GGTACGAAAA
CTGGGCTTCA CCACCTGCTT TATGGCAGAT GGTGAGATTA TAGCAGCTGG TCCCCCTGAT
CAGATCTTTC AGTTAAACTA TGTAAAAGAG AAGTTCTATG CCTCCTGA
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| Protein sequence | MHTVRTYIPF FLLFIPLTAG AFANAYFQSF IMEIFIWSLF AMSFNIIYGY TGLLSFGVSL
FFGAGCYGFA LSLIHWQLSI PGALLFAIAL TTALATLTGL LVLKIRSHYF VIVSVLLTLI
PFYLANHFPQ ITGGDDGISV QLSDKLIPGT GLSPYNPRHM YWTVCSLAIL VLFLCYRFLK
SPVGLILKGL RENEVRAQFL GYNTHRYQFL AYIVSAVLAG IAGSLYVLAF KYTSSIFFLW
SLSGEAIIWT ISGGRGTFLG PFIGTAGFLL FKDELSSRVE YYPLIVGICL ILLIRYRKNG
LMGMIPLPPG WINNYAGKRQ LTQPATTAPP SPSNNTGLHF ILSTDDLGIS FDGMKAVKGV
TLELSCREIK IKTNTPSGTE WFLKENNNEH FPCLTMIGLN GAGKTTLFNI LSGVYTKAHG
QMKLLNEELF VKEKGYSKIK YSQHEIVEKG LTRTFQQVQL FPELTVLENF QIAAQAKINK
WDYSTDREQA AQRLTIVEEI ISLVNLTEEK YTAAQHLSYG RQKMLDIGLS IASGGQILLL
DEPTAGVSPH EIVLITNLLL RLSSTHTLIL IEHDLEVVRK LGFTTCFMAD GEIIAAGPPD
QIFQLNYVKE KFYAS
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