Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6058 |
Symbol | |
ID | 8362240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7656836 |
End bp | 7657996 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968192 |
Product | hypothetical protein |
Protein accession | YP_003125671 |
Protein GI | 256425018 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTCA ACAGCGATCA GTTTTATTCC CGGTTACCGG TCAACCGTAT TCCACTAAGC GAATTACTCA CGGAAGACCA CCTCTTCTAC AAAATACCGG AAGACTGGTT CGTGATTGTC ACCGACATCA AAGGATCCAC TGCCGTGGTA CAAAGCGGAC AACACGAAAC CGTCAACCTG GTTGCTACAG GAAGTATCGT TGCCGTACTG AACATCAGTT TTAAAGCCAA TATTACCGTA CCTTTTTTCT TCGGAGGTGA TGGAGCGACC TTCATTATCC CTCCCTCAGT AAAAGATGCG GCCATCAAAG CCCTCCTGCT GTATAAAAAG AATACGCAGG AGAGCTTTGA TATCAACCTC CGGATCGGCG TCGTAGCCGT AAATGATATT TATGCCGCCG GTCATACACT CAGGGTCAGT AAATTCAATA GCAGCGGTAA CTTTCATATT CCGGTTGTCC TGGGCAACGG ACTGAACTAT GCCGAAAGAC TGATCAAAGG AGAAGACTAC CTCCTCCCCG GCGACCTCCT GGCAGATGAT GAAGTTGACC TCAGTGGAAT GCAATGCCGC TGGGATAAGA TCAAACCACC GGAAAGCAAT TATGAGGTCG TATCACTGAT CGTAATGGCC ACCAAACCCG AAGAACAGGC CAGCGCCTTC CGGCAGGTCA TTACACATAT CGACGCTATT TACGGCGCCC CTGAAAAAAG ACAGCCAATC TCTATCCCGC AACTACGCCT GAAAACCACC TTCGCAGAGC TGGGTCTCGA ACTACGCGCC CGATTCGGCC GCAAACGACT ATTCAAACTG ATCCAGTCAT GGTTTACTAC ATTTTTAGGC TATATCTACT TCCGCACCAG GCAAGGTAAG TCCTACCTCA CACGCCTCGT CGAAATGTCA GACACGCTGG TCATTGACGG CAAAATCAAT ACCGTGATCA CCGGTACCGA AACCCAGCGC CTCCAGCTCG TAAAACACCT TAATCAACTG GAAGAAGCCG GCAGGATCTT TTATGCTTTC TACGTCAGCA AAGAGTCCGT CATGTCCTGT TATGTACGCG ACTTCAAACA GGAACATATC CACTTCGTAG ATGGCGCGGA AGGCGGCTAC ACAAAAGCGG CCGGTGTATT GAAGCTCAAA ATTGTCCACC TCTCCCACTA A
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Protein sequence | MTVNSDQFYS RLPVNRIPLS ELLTEDHLFY KIPEDWFVIV TDIKGSTAVV QSGQHETVNL VATGSIVAVL NISFKANITV PFFFGGDGAT FIIPPSVKDA AIKALLLYKK NTQESFDINL RIGVVAVNDI YAAGHTLRVS KFNSSGNFHI PVVLGNGLNY AERLIKGEDY LLPGDLLADD EVDLSGMQCR WDKIKPPESN YEVVSLIVMA TKPEEQASAF RQVITHIDAI YGAPEKRQPI SIPQLRLKTT FAELGLELRA RFGRKRLFKL IQSWFTTFLG YIYFRTRQGK SYLTRLVEMS DTLVIDGKIN TVITGTETQR LQLVKHLNQL EEAGRIFYAF YVSKESVMSC YVRDFKQEHI HFVDGAEGGY TKAAGVLKLK IVHLSH
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