Gene Cpin_6051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6051 
Symbol 
ID8362233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7648355 
End bp7648801 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content44% 
IMG OID644968185 
Productthioredoxin domain protein 
Protein accessionYP_003125664 
Protein GI256425011 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2143] Thioredoxin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0119737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.502924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAT TTAGATTAAG CAGTAAAATT TTGATCACCA GTGTGCTGTT TCTCGTATTT 
AATAGTGGAG TGTTTGCGCA GGAGATCAAT TTCACAAATG GTAGCTGGAA GGAAGTGACT
GCGCAGGCTG CTAAAAGCGG TAAACTCATA TTTGTAGATG TCAATACGAC CTGGTGTGGT
CCCTGCAGGT TGCTGAAGTC GACTACATTT AAGGATGAAG GTGTTGCTAC CTATTTTAAT
CAGCATTTTA TCAGTTATAG TGTAGATGCG GAAAAAGGAG AAGGGGAGAC CCTGGCAGAG
CAATGGAAGG TAAGGGCGTA TCCCACTCTA TTACTAGTGA ATGCGGAGGG AAAGATTGTA
TCCCGGCAGA TCGGATATGT GAACGCAGAT CGATTACTGG GCTGGGGTAA GGAAAGTGCA
GTACAACGAC CAGTGGCTGC AAAGTAA
 
Protein sequence
MLKFRLSSKI LITSVLFLVF NSGVFAQEIN FTNGSWKEVT AQAAKSGKLI FVDVNTTWCG 
PCRLLKSTTF KDEGVATYFN QHFISYSVDA EKGEGETLAE QWKVRAYPTL LLVNAEGKIV
SRQIGYVNAD RLLGWGKESA VQRPVAAK