Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6051 |
Symbol | |
ID | 8362233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7648355 |
End bp | 7648801 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644968185 |
Product | thioredoxin domain protein |
Protein accession | YP_003125664 |
Protein GI | 256425011 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2143] Thioredoxin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0119737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.502924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAT TTAGATTAAG CAGTAAAATT TTGATCACCA GTGTGCTGTT TCTCGTATTT AATAGTGGAG TGTTTGCGCA GGAGATCAAT TTCACAAATG GTAGCTGGAA GGAAGTGACT GCGCAGGCTG CTAAAAGCGG TAAACTCATA TTTGTAGATG TCAATACGAC CTGGTGTGGT CCCTGCAGGT TGCTGAAGTC GACTACATTT AAGGATGAAG GTGTTGCTAC CTATTTTAAT CAGCATTTTA TCAGTTATAG TGTAGATGCG GAAAAAGGAG AAGGGGAGAC CCTGGCAGAG CAATGGAAGG TAAGGGCGTA TCCCACTCTA TTACTAGTGA ATGCGGAGGG AAAGATTGTA TCCCGGCAGA TCGGATATGT GAACGCAGAT CGATTACTGG GCTGGGGTAA GGAAAGTGCA GTACAACGAC CAGTGGCTGC AAAGTAA
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Protein sequence | MLKFRLSSKI LITSVLFLVF NSGVFAQEIN FTNGSWKEVT AQAAKSGKLI FVDVNTTWCG PCRLLKSTTF KDEGVATYFN QHFISYSVDA EKGEGETLAE QWKVRAYPTL LLVNAEGKIV SRQIGYVNAD RLLGWGKESA VQRPVAAK
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