| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6047 |
|---|
| Symbol | |
|---|
| ID | 8362229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7645363 |
|---|
| End bp | 7646424 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644968181 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_003125660 |
|---|
| Protein GI | 256425007 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1231] Monoamine oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.629217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.078923 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGG ATAAAAGGAT TGTCATTATC GGAGCCGGAC TCAGTGGTCT TACCCTGGCC
TATACATTAA AGAAGAAAGG AATTAACGCA ACCATACTGG AAGCTGCTGA CAGACCCGGA
GGCAGGATCC ATACGCAGAT AGGCGTAGCA GGCACTCCAC TGGAGCTGGG CGCCACCTGG
TTCTCCGACC AGCATCCACA AATGATAGCA CTATTACAGG AACTGCATCT GCAAAAGTTC
CCGCAATTCT CCGAAGGTAT TTCCCTGTTT CTAACCAAAT CATTTGAACC ACCGCAACAG
TTCTTTATAC CAGCAGGCGA AGCGCCTTCT TACAGAATAA CCGGAGGAAC GGAACAACTC
ATAAAAACAT TACAGACCCA AATACCGGCA GATCGGCTGT TATTAAATAC AAAGGTCACG
GCAATAAAAG AAAGGCCGGA AAACCTGCTC ATAATAACAG AAAATGGGAA TGAATTCGAG
GCTGATATTG TGATAAGTTG TATGCCCCCT AAGACGGCGG TATCATTGAT AGAATTCTCT
CCTGCGCTGC CAGAAGATGT CCGATCGATA CTACATCGTG TACAAACCTG GATGGCCGGC
GCTATAAAAT TCGTCCTGGA ATTCGAATCT CCATTCTGGC GGAAAAAAGG CTTTTCCGGC
ATGTTGTTCA GCCATACCGG CATCATCTCC GAAATGTATG ATCATACAAA TGCAACAGAA
AACAGATTTG GATTTACAGG TTTCCTGAAC GGCGCTACCG CTGTTTATAG CCAGGAAGAA
AGAAAAGTAT ATGTAATAAA ACAGCTGCAG GATCTCCTGG GAGAGGATGT CCTGCGTATG
ACGGCCTACT ATGACAAAGT ATGGGTGGAT GAAGACCTGC TCTACAGCAA TTCACCCGAT
TTCCGGCCAC ACCAGTACAA CGGTCATCCG GTGCTACACG AAGCATATCT GAACAACAGG
TTCTATTTCT GCGGCACAGA AACAGCCGCC TTACATCCTG GTTATATGGA AGGAGCCGTA
CTATCAGCGA TAACAGTAGC AGAAAAGCTA AACATGCAAT AA
|
|---|
| Protein sequence | MKTDKRIVII GAGLSGLTLA YTLKKKGINA TILEAADRPG GRIHTQIGVA GTPLELGATW
FSDQHPQMIA LLQELHLQKF PQFSEGISLF LTKSFEPPQQ FFIPAGEAPS YRITGGTEQL
IKTLQTQIPA DRLLLNTKVT AIKERPENLL IITENGNEFE ADIVISCMPP KTAVSLIEFS
PALPEDVRSI LHRVQTWMAG AIKFVLEFES PFWRKKGFSG MLFSHTGIIS EMYDHTNATE
NRFGFTGFLN GATAVYSQEE RKVYVIKQLQ DLLGEDVLRM TAYYDKVWVD EDLLYSNSPD
FRPHQYNGHP VLHEAYLNNR FYFCGTETAA LHPGYMEGAV LSAITVAEKL NMQ
|
|---|
| |