| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6046 |
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| Symbol | |
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| ID | 8362228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7644341 |
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| End bp | 7645288 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644968180 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003125659 |
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| Protein GI | 256425006 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0485371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAGGG TGAGGGATCT TTGTAATTTA GAATTGAATA TCTACCATAT GGCTAAGGAG
AAGGCAAATA TTATCAGTGA ATATCATCTG CATCAGCACC AACCTCAAAA ACCGCAATTT
GCCATTCATG ATCTGCAAGA ATATTTGCAG CAGCATCATG GTAATGCCTC CAGACCGCAT
ATACACAGTT TTTATCAGAT TATCTGGTTT CAGTCTGGTA ACGGCAAACA CTTTGTTGAT
TTCCAGGAAT ATGAGGTGTT TGATAATGCG ATATTCTTCA TTGCAATGAA TCAGGTCCAT
TATTTTGACA GTAGCAGTGA TTATAAGGGG ATGCTGATCC ATTTTAATGA ATCTTTTCTA
GTGCAGGATA GTAATGAGGT GGCCTATTTT CTGAAATGCA GTCTGTTCAA TAATCCTTAT
CGGCAGCCAT CCTGTTGTAT AGGCAAGGGC ATTGAAACCG TATTGGAAAG CTATATACAA
CAGATCCGCC GTGAGCTGGA AGATGGAGAG GAGTTTGGCC GGGAAGAGTT ATTGAAGATC
TACCTGAAGG CGTTCCTGGT ACAGGTACAG CGCCGGAAGA ATGCTTTTGA GCAGACGGAA
GGAAAGACGC CGTTTATGGT AGACGAGAAA AGGTTGCAAC TGGTGCAGTT TGTGAATTTT
ATTGACGATA ATTATATGAA GGGGCTATCG GTGGCAGAGT ATGCCCGGCT GATGCATATC
TCTTCCAGGA CTTTATCTGA CCTGACCAGT CAGCTGCTGA ATAAAACGCC CTCATTAATG
ATCCAGGAGC GGATTATCCT GGAGGCGAAA CGTTTGTTGC TTCATTCCAG TCTTAATATC
AACCAGATTG GTTACAGACT GGGTTTTGAT GATCCTTCTT ATTTTGTCAA GTATTTTAAG
AAACATACGA TTATTTCTCC GTCGGAGTTC AGGAAGGCTG TTTCCTGA
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| Protein sequence | MVRVRDLCNL ELNIYHMAKE KANIISEYHL HQHQPQKPQF AIHDLQEYLQ QHHGNASRPH
IHSFYQIIWF QSGNGKHFVD FQEYEVFDNA IFFIAMNQVH YFDSSSDYKG MLIHFNESFL
VQDSNEVAYF LKCSLFNNPY RQPSCCIGKG IETVLESYIQ QIRRELEDGE EFGREELLKI
YLKAFLVQVQ RRKNAFEQTE GKTPFMVDEK RLQLVQFVNF IDDNYMKGLS VAEYARLMHI
SSRTLSDLTS QLLNKTPSLM IQERIILEAK RLLLHSSLNI NQIGYRLGFD DPSYFVKYFK
KHTIISPSEF RKAVS
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