Gene Cpin_6039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6039 
Symbol 
ID8362221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7638157 
End bp7638858 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content42% 
IMG OID644968173 
Producthypothetical protein 
Protein accessionYP_003125652 
Protein GI256424999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00899687 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.288255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCATA CATTTGCCGA ACAGGTTATT GCATTCAACA GTCATCTGCA TTATACGGGT 
ATACTGCCTC CCGGCATCCG GATCATGAAT CCGTTTCGTG AACAGCCGCA GGTAATGGAT
ATTATGCGGC AATTTTACCG TAAATATTAT GGCGATCATC ATCAACGCCG TATGATAATG
GGAATTAATC CTGGCAGACT GGGATCCGGA GCAACAGGTA TTCCTTTTAC TGATACAAAG
CGGTTGACAG AGGTGCTTGA TATTGGTATT GAAGGGGTGA AGACGCATGA ACCTTCCTCG
GTGTTTGTGT ATGATGTTAT CAGTGCTTAC GGCGGACCAA CAGCCTTTTA TAAGGATTTT
TATTTTGCTT CTGTTTCTCC GCTGGGATTT ACATCTGTGA AAGCGGACGG TTCGGAGGTT
AATTATAACT ACTACGATAG CAAAGCCCTG ACAAATGCGG TGTATGACTT TATGGTGAGC
AGTATCCGTG AACAACTGGC TTTTGGTATT GATACAGATG TGTGTTATTG TTTTGGAACG
GGAAAGAATG CTGCTTTCCT GCAACAACTG AATGCCAAGG AACAGTTTTT TAAAACGATT
GTTCCGTTGG AACATCCACG GTTTGTTATG CAGTACCGGC TGAAGCGTAA AGAAGAATAT
ATTACCAAAT ACCTGGAAGC TTTTGCTGCC TATAGTAAAT AA
 
Protein sequence
MMHTFAEQVI AFNSHLHYTG ILPPGIRIMN PFREQPQVMD IMRQFYRKYY GDHHQRRMIM 
GINPGRLGSG ATGIPFTDTK RLTEVLDIGI EGVKTHEPSS VFVYDVISAY GGPTAFYKDF
YFASVSPLGF TSVKADGSEV NYNYYDSKAL TNAVYDFMVS SIREQLAFGI DTDVCYCFGT
GKNAAFLQQL NAKEQFFKTI VPLEHPRFVM QYRLKRKEEY ITKYLEAFAA YSK