Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6039 |
Symbol | |
ID | 8362221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7638157 |
End bp | 7638858 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644968173 |
Product | hypothetical protein |
Protein accession | YP_003125652 |
Protein GI | 256424999 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00899687 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.288255 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCATA CATTTGCCGA ACAGGTTATT GCATTCAACA GTCATCTGCA TTATACGGGT ATACTGCCTC CCGGCATCCG GATCATGAAT CCGTTTCGTG AACAGCCGCA GGTAATGGAT ATTATGCGGC AATTTTACCG TAAATATTAT GGCGATCATC ATCAACGCCG TATGATAATG GGAATTAATC CTGGCAGACT GGGATCCGGA GCAACAGGTA TTCCTTTTAC TGATACAAAG CGGTTGACAG AGGTGCTTGA TATTGGTATT GAAGGGGTGA AGACGCATGA ACCTTCCTCG GTGTTTGTGT ATGATGTTAT CAGTGCTTAC GGCGGACCAA CAGCCTTTTA TAAGGATTTT TATTTTGCTT CTGTTTCTCC GCTGGGATTT ACATCTGTGA AAGCGGACGG TTCGGAGGTT AATTATAACT ACTACGATAG CAAAGCCCTG ACAAATGCGG TGTATGACTT TATGGTGAGC AGTATCCGTG AACAACTGGC TTTTGGTATT GATACAGATG TGTGTTATTG TTTTGGAACG GGAAAGAATG CTGCTTTCCT GCAACAACTG AATGCCAAGG AACAGTTTTT TAAAACGATT GTTCCGTTGG AACATCCACG GTTTGTTATG CAGTACCGGC TGAAGCGTAA AGAAGAATAT ATTACCAAAT ACCTGGAAGC TTTTGCTGCC TATAGTAAAT AA
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Protein sequence | MMHTFAEQVI AFNSHLHYTG ILPPGIRIMN PFREQPQVMD IMRQFYRKYY GDHHQRRMIM GINPGRLGSG ATGIPFTDTK RLTEVLDIGI EGVKTHEPSS VFVYDVISAY GGPTAFYKDF YFASVSPLGF TSVKADGSEV NYNYYDSKAL TNAVYDFMVS SIREQLAFGI DTDVCYCFGT GKNAAFLQQL NAKEQFFKTI VPLEHPRFVM QYRLKRKEEY ITKYLEAFAA YSK
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