| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6019 |
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| Symbol | |
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| ID | 8362201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7617364 |
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| End bp | 7618383 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968155 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003125634 |
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| Protein GI | 256424981 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACAGA ACAACAATCA GGGAGCACTT CAGCATCCAC TCGGCACAGG TTTTAACGCT
CAGTCCACTG CTTCAGATGT TATCAGCGGC ATAGATCTGA CAGGTAAGAT TGTTATCGTG
ACAGGCGGTA ATGCAGGTAT TGGTGTGGAA ACTACAAGAA CACTGGCAGC AGCCGGCGCT
ACCGTGATCG TTCCGGCGAG GGATGTTGAT AAGGCCAGAA AGAACCTGGA AGGTATTCAA
CGGGTAGAGA TCGAAGCGAT GGATTTTATG GATCCTGGCT CTATTGATGC CTTTGCTGAT
AAGTTCCTTC ACTCCGGCAG ACCTTTACAT CTGCTTATAA ACAATGCCGG TATTATGTGG
GTGCCTTTAC GAAAAGATGC GCGTGGCATA GAGTCTCAGT TTGTTACGAA TTACATCGGT
CAGTTTCATC TGACGGCAAA ACTCTGGCCT GCGCTTAAAC GGGCAAATGG CGCACGTGTG
GTGAATGTAT CTTCTCTAGG TCATCACATG GGTAATATCG ATTTTAACGA TCCGAATTTC
GAACACCGGG ATTATGAAAC ACTGGCGGCT TATGGTCAAT CCAAAACAGC CAGCAACCTG
TTTGCCCTGG AACTGGATAA CCGTGCCAGG GACTATCATG TACGCGCATA TGCTGTACAT
CCCGGATCTA TTGGTGGTAC TGAATTAGCG CGTGAGGCTC CTGTAGCGCT TTTTCAGCAA
ATGGGTTTCC TCGATGAAAA CGGCGACATG CGTCCTGAGG TATTGGCTTC ACTGAAAACA
ATCCCACAGG GAGCTGCCAC TACAGTATGG GCAGCAACCA GTCCGCTACT CAATGACCTC
GGCGGCGTAT ACTGTGAAGA TGGCGATGTG GCTGAGTTAT TATCTTTTGA TCCTGCTGTT
GAGAGCAATG CTAAATTTCA CCAGAGCGGG GTTATGCAGT ATTCACTGGA TGAACATAGT
GCAAAAAGAC TGTGGGTAAT GAGCGAAAAG ATGACGGGTA TTGCATTTGA CGTCAAATAA
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| Protein sequence | MIQNNNQGAL QHPLGTGFNA QSTASDVISG IDLTGKIVIV TGGNAGIGVE TTRTLAAAGA
TVIVPARDVD KARKNLEGIQ RVEIEAMDFM DPGSIDAFAD KFLHSGRPLH LLINNAGIMW
VPLRKDARGI ESQFVTNYIG QFHLTAKLWP ALKRANGARV VNVSSLGHHM GNIDFNDPNF
EHRDYETLAA YGQSKTASNL FALELDNRAR DYHVRAYAVH PGSIGGTELA REAPVALFQQ
MGFLDENGDM RPEVLASLKT IPQGAATTVW AATSPLLNDL GGVYCEDGDV AELLSFDPAV
ESNAKFHQSG VMQYSLDEHS AKRLWVMSEK MTGIAFDVK
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