| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5978 |
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| Symbol | |
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| ID | 8362160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7583665 |
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| End bp | 7584858 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644968118 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003125597 |
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| Protein GI | 256424944 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC AATGGAATAA AGTTATTATT TTATCAATTG CTCAATCACT TTTCCAAACT
TCATCAATTA TAGTTTTTAC TATATCAGGC ATGGTGGGGC TGAACCTTGC ATCGAATAAA
AGTTTGGCAA CATTACCTAT TGGCATGATG TCATTAGGGA CAGCTATGAT GATGATTCCA
GCTTCCTTTA TTATAAAGAA AATTGGTCAG CGAAAGGGAT TTATGTCAGG TATTGCATTT
GGTCTTAGTG GTGGGTTATT AGCATCTTAT GCAATCGTTA GGGGTTCTTT CCCGCTATTT
GTTATGGCTA ACATGATGAT CGGATTTTAT CAGGGGTTTT CTCAATATTA CCGATTTGCA
GCTGCTGATG CAGTAACAGA TGAGAATAAA GGGAAAGCAA TCTCGTTTGT ACTTGCTGGA
GGGGTAGTGG CAGCTATAGC CGGGCCTAAC CTTGCCAGAT TTACACAGCA TGTAGGACCA
GTACCATTTG CTTACTGTTA TTTATCTATA GCGATTTTGA GTGTATGTGC GTTGGCTATC
ATATTTAATA TACAACAGCC AAAGGTTTCA TTGCAAAATA TAGTGGAGGA TTTACAACCA
GCCAGGTCTC TGAGGGAGAT AGTTTTCAAC AGGCTTACAA TTAGTGCACT GATTTCATCT
GCAGTGGGTT ATTCGGTAAT GAATATGGTA ATGACGGCCA CTCCATTGGC AATGCATCAT
TCCGGACACA ACAGTGATGA TGCAGCTATG GTGATACAAT GGCATGTCTT GGGTATGTTC
GTACCATCAT TTTTTACCGG TACGCTGATA AAAAGATTCG GTGTACATAG AATCATCATC
ACCGGTATTA TTATATTATT TATACATGTG TCATTTGCAA TATCAGGTAC CGATTTTATG
CATTTTGTTT CTGGTCTTAT TTTGTTAGGA ATTGGCTGGA ATTTTATGTT TATAGGTGGT
ACAACATTAC TTACGCAGGC ATATCGGCCA CAGGAGAAAG CAAAAACCCA GGCAATGCAC
GACTTCTTTG TATTTACCGT TATCAGTGCT TCTGGCTTTT CCGCTGGTAA CCTTCTAAAT
GCTTATGGGT GGAAGGGAGT TAATCTGGCT GTCATTCCTT TGCTGGTTAT TTCGCTAACT
ACCATGGTTA TTAATAGCAT TAGAAAAACA GGTACGCAAC CAAGAATACA ATGA
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| Protein sequence | MKTQWNKVII LSIAQSLFQT SSIIVFTISG MVGLNLASNK SLATLPIGMM SLGTAMMMIP
ASFIIKKIGQ RKGFMSGIAF GLSGGLLASY AIVRGSFPLF VMANMMIGFY QGFSQYYRFA
AADAVTDENK GKAISFVLAG GVVAAIAGPN LARFTQHVGP VPFAYCYLSI AILSVCALAI
IFNIQQPKVS LQNIVEDLQP ARSLREIVFN RLTISALISS AVGYSVMNMV MTATPLAMHH
SGHNSDDAAM VIQWHVLGMF VPSFFTGTLI KRFGVHRIII TGIIILFIHV SFAISGTDFM
HFVSGLILLG IGWNFMFIGG TTLLTQAYRP QEKAKTQAMH DFFVFTVISA SGFSAGNLLN
AYGWKGVNLA VIPLLVISLT TMVINSIRKT GTQPRIQ
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