Gene Cpin_5977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5977 
Symbol 
ID8362159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7582566 
End bp7583618 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content38% 
IMG OID644968117 
Productamine oxidase 
Protein accessionYP_003125596 
Protein GI256424943 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1231] Monoamine oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATG ATTACTTAAT TATAGGTGGT GGATTAAGTG GCCTTACTTT AGCTTATTTG 
TTAAAAAAAA AGGGAATTAA CGCACTAATC CTGGAAGGGG CCGATAGAAC AGGTGGCAGA
ATCAAAACAG TTAACGGTAC TTTAGGTACA CCGATGGAGT TAGGAGCCAC CTGGTTCTCA
GATGCACATA TCAACTTAAT AGAACTATTA GATGAATTGG GCCTTCATAA GTTTCCGCAA
TATAATACAG GTCTTTCCTT GTTCTATACC CGGCCAGATC AACCACCCCA GCAATTTTAT
GTACCAGAAG AAACATCTCC TTCCTATCGG CTGGCAGGTG GTACGCAGAA CCTCATTAAA
AACCTCATGG GGAAGCTGGA AAAAAATACT ATACAACTTA ACACAAAAGT CAGTAAAATT
TCTGCTAAAA ACGAATACCT ATATGCGGAG ACAACAGACA ATAGAATTTA TAAAGCCCGG
TATATATTTT TATGTTTACC ACCACAACTC GCAGGATCCG ATATAAAATT TGAGCCTTCA
TTACCTGAAA ACCTACTTTC AATTATGCCC AGGATACAAA CGTGGATGGC AGGGTCCATT
AAATTTATAC TTGAGTATGA TCAACAATTC TGGAGAAAGG CGGGTTTTTC AGGCATGATT
TATAGCAATG CTGGTATTAT AACAGAAATG TATGACCATA CAAATTATGA AGGTAATAAA
TTTGGGTTTA CCGGATTTTT GCACGAAGAG GCGCAACAAT TTAGTCAGGA AGAACGTAAA
AAGATGGTCC TGGAACAAGT AGCTCACAAC TATGGAGATC GGGCGTTATA TCCGTTATTA
TACGAAGATA AAATCTGGAC AGGTAAATTT TTACTTTCAG GTAATCCAAT TATCAGGTTA
CGGCATTTAA ATAATGGACA TCCATTACTA CAATCCCGAT ATATGGATGA CCGCCTTTTT
TTCTGTGCAA CAGAAAGTTC ACCTCATTAT CCTGGCTATA TGGAAGGGGC TGTTATGGTA
GCGAAAAATA TAATGAAAAC ATTGGGAGTA TAA
 
Protein sequence
MEYDYLIIGG GLSGLTLAYL LKKKGINALI LEGADRTGGR IKTVNGTLGT PMELGATWFS 
DAHINLIELL DELGLHKFPQ YNTGLSLFYT RPDQPPQQFY VPEETSPSYR LAGGTQNLIK
NLMGKLEKNT IQLNTKVSKI SAKNEYLYAE TTDNRIYKAR YIFLCLPPQL AGSDIKFEPS
LPENLLSIMP RIQTWMAGSI KFILEYDQQF WRKAGFSGMI YSNAGIITEM YDHTNYEGNK
FGFTGFLHEE AQQFSQEERK KMVLEQVAHN YGDRALYPLL YEDKIWTGKF LLSGNPIIRL
RHLNNGHPLL QSRYMDDRLF FCATESSPHY PGYMEGAVMV AKNIMKTLGV